Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1673 ATGGGTCGTCGGAGAACGTGCGAATGGGTCGTCAGAGCAGACAGAGAATGGGTCACTGGAGAACGAACGAAGGGACAAAGAAATAACAAACTCGATTCGTTGAAGACTCTGAAACGCCGGTGGGAGAGCTCGTCGGTGAATGGGTCGTCGGGAGGTGGGCTCGCCGATGAATGGGCCAACGGGAGGACTCGCCGGAGTGTTGTCGGAAAAGGAGGGTTGCTGGAGAAATTAGGTTCATTTATGTATGGCATCACGGGCTTGAGTATGGAGTCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAATAGTGCTGGAATTCCCGATCCTTTTGGAAAAGTATACTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGGTCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCTGTTGGAACATTAGCTGCAACTCTTGCAACAACTGCATTGTATCTGGTCTCTGTGCTGCTGTTTGGAGCACTGGCAACCAGACAGAGACTATTGACAGATAGGCTTCTTACTGCTACGGTTGCATGGCCTTTCCCAGCAATTATTTATGTTGGAATTATTTTATCAACCCTCGGAGCTGCTCTTCAGAGCCTGACAGGAGCCCCCCGCTTGCTAGCAGCTATAGCCAATGATGATATATTACCCATTCTGAACTATTTTAAAGTTGCAGATGGCGGTGAGCCATACTTTGCAACCCTCTTTACTGCAGTTCTCTGCATCGGATGTGTCATAATCGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAGATTCCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGCGTTGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGCAGTCTTCGTTCGCTTGGAGGAATTAGGCTTACCAATCATGTTAAAGCGAGCCAAGTCCACCCAAAGAATTGGTATCCCATACCCTTGATATTTTGCCGACCATGGGGGAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGACTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATACTTGATGGAGATTACCACGAACGGGTTGAAGATGCAAAAACTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGTTGCGAAGGAGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGAATTGTTCAGACGATGGGTCTTGGAAATCTCAAGCCGAATATTATAGTCATGCGATACCCAGAAATATGGCGTCGTGAAAATCTAACTGAGATTCCGGCTACTTTTGTTGGAATAATAAATGACTGCATCGATGCTAACAAGGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGGACTATAGACTTGTATTGGATTGTGAGGGATGGAGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAAGTGTTCTGCATTGCAGAGGAGGAAGCTGACGCCGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATCGTTATAACGATAAAATCATGGGACACACAAGGGGAGGGCGGGCAACAAGATGAATCAATGGAAGCGTTCAATGCTGCTCAAGGGAGGATTGCTAGTTATCTAGGTGAAATGAAGGCAGCTGCTGAGAGCAGAGGAACCACACTAATGGCTGATGGGAAGCCTGTGAGCGTGGATGAGAAGCAAGTCGAGAAGTTTCTACATACAACTCTCAAGTTGAACTCAACAATTCTGAGATACTCGAGAATGGCTGCAGTCGTGCTCGTGAGCCTCCCGCCACCTCCTGTCAACCATCCTGGATACTTCTATATGGAATACTTGGATTTGTTGGTTGAGAATGTGCCTAGGCTCTTGATCGTAAGAGGATACCGCAGAGACGTCGTAACGTTGTACACGTAG 2232 46.01 MGRRRTCEWVVRADREWVTGERTKGQRNNKLDSLKTLKRRWESSSVNGSSGGGLADEWANGRTRRSVVGKGGLLEKLGSFMYGITGLSMESFKENWSSDYQMTNSAGIPDPFGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPVGTLAATLATTALYLVSVLLFGALATRQRLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGGEPYFATLFTAVLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGGIRLTNHVKASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKTACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEEADAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQGEGGQQDESMEAFNAAQGRIASYLGEMKAAAESRGTTLMADGKPVSVDEKQVEKFLHTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPGYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38969139 38975537 - Maker00035834 Lcy5g1673 633488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1673 743 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 82 743 IPR004842 GO:0006811(InterPro)|GO:0006884(PANTHER)|GO:0015377(InterPro)|GO:0015379(PANTHER)|GO:0016020(InterPro)|GO:0055064(PANTHER)|GO:0055075(PANTHER)|GO:1902476(PANTHER)|GO:1990573(PANTHER)
Lcy5g1673 743 Pfam Amino acid permease 109 356 IPR004841 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy5g1673 743 Gene3D Amino acid/polyamine transporter I 74 351 - -
Lcy5g1673 743 Pfam Solute carrier family 12 542 742 IPR018491 GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy5g1673 743 Pfam Solute carrier family 12 412 533 IPR018491 GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy5g1673 743 FunFam Solute carrier family 12 member 74 353 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1673 K14427 - csv:101216218 1206.82