Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1674 ATGTGCCCAAGCCTCGCTTCTCGGAGTGAGACCCTGGTAAGAAGGCGTGGCCAAGTAGAAAAGATAACCAGCCACATTTCTCCATCATCCCAAATCCATTTGTGCCTTTCCCTTCACTTCACCTTGTCTTCGCCGTCGTTACTTGCCTACTCCTTGCTGTGGATTGTTGGCATGGCTGGCATTGGTGAGTCATTAGTGCTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATTTCACTAAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCCGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTACCAGCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACTGTTGCAGAACCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTTATTGTGTTTGGTGGTGTGAAGATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTACTTTGCATATTTCTTGGAATTTTTCTGGCAAAGAAAAACGACCCTGCAGATTTCAAGCACTACACTTACCTCTAA 693 44.16 MCPSLASRSETLVRRRGQVEKITSHISPSSQIHLCLSLHFTLSSPSLLAYSLLWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGIFRETVTKVNGTTVAEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGIFLAKKNDPADFKHYTYL 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38981149 38984710 - Maker00035861 Lcy5g1674 633489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1674 230 Gene3D Amino acid/polyamine transporter I 35 228 - -
Lcy5g1674 230 Pfam Amino acid permease 49 228 IPR004841 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy5g1674 230 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 52 219 IPR004842 GO:0006811(InterPro)|GO:0006884(PANTHER)|GO:0015377(InterPro)|GO:0015379(PANTHER)|GO:0016020(InterPro)|GO:0055064(PANTHER)|GO:0055075(PANTHER)|GO:1902476(PANTHER)|GO:1990573(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1674 K14427 - csv:101216218 313.923