Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1974 ATGTCAGCTTACTGGTGGAAAAGCTTCGACGAGGACGAAGATCGACCTGAGAAGCCTCGACGATGTGGAGTTACAGAGATGAGAGGCCCCCATTACACTCTCTCGAGCCAAAATGTTATTCAGGAAATTTTCGAGTCTATGGGTCAATTTGTCGATGGATTGAAGTTCTCCGGGGGTTCCCACAGCCTGTTGCCGAGGGATTTTGTGAAGGAGGTGACGGAAATGGCTCATCGACATGATATCTATGTCAGTACGGGCGACTGGGCGGAGCATTTACTTCGCAAAGGTCCATCGGGTTTCAAAGAGTATGTGGAGGAATGTAAGCTCTTAGGATTTGACACTATTGAGCTCAACGTGGGATCACTTGAAGTTCCTGAAGAAACTCTCCTGAGATATGTGCGCTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAATTTGCAGTGAAGTTCAATAAGTCTGACATTCCCATCAGTGGCAATCGAGCATTTGGAGCTTATATTGTTCCAAGGCCTCGGTCTAATGAACTTGTAGAAGATGTTGATCTTTTGATCAGAAAGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATAATGATCGATGCAGACGACGTCAGTAAACACACCGATTCTCTTCGAGCAGACATTATCGCCAAGATCATTGGGCGTCTTGGTCTAGAGAAAACGATGTTTGAAGCATCGAATCCCAGAACGTCGGAGTGGTTTATCAATCAATACGGCCCAAAGGTAAATCTCTTTGTGGATCACTCTCAAGTCATGGATCTAGAGTGCCTTCGCGGCCGCAACCTGGGTAAAAATCACTCGTCTATTCTTGTTGGTTCCTCCTACTTTCGTATTTAA 864 46.3 MSAYWWKSFDEDEDRPEKPRRCGVTEMRGPHYTLSSQNVIQEIFESMGQFVDGLKFSGGSHSLLPRDFVKEVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLLGFDTIELNVGSLEVPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPISGNRAFGAYIVPRPRSNELVEDVDLLIRKAERCLEAGADMIMIDADDVSKHTDSLRADIIAKIIGRLGLEKTMFEASNPRTSEWFINQYGPKVNLFVDHSQVMDLECLRGRNLGKNHSSILVGSSYFRI 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42706174 42711621 - Maker00036741 Lcy5g1974 633789

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1974 287 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 13 267 IPR036112 -
Lcy5g1974 287 Gene3D Aldolase class I 9 274 IPR013785 -
Lcy5g1974 287 PANTHER - 3 286 IPR052597 -
Lcy5g1974 287 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 270 IPR003830 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1974 - - - - 0.0
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lcy7g1234 . 34 780 Subtilisin-like Serine Gene Family AT1G01900 55.8 9.9e-236 813.9
Lcy7g1232 . 32 777 Subtilisin-like Serine Gene Family AT1G01900 55.3 9.9e-228 787.3
Lcy7g1235 . 12 782 Subtilisin-like Serine Gene Family AT1G01900 53.9 7.9e-225 777.7
Lcy12g2078 . 14 769 Subtilisin-like Serine Gene Family AT1G04110 67.7 8.5e-312 1066.6
Lcy9g2281 . 29 771 Subtilisin-like Serine Gene Family AT1G20150 52.2 7.4e-223 771.2
Lcy9g2281 . 8 512 Subtilisin-like Serine Gene Family AT1G20160 61.1 1.4e-170 597.0
Lcy1g0084 . 9 834 Subtilisin-like Serine Gene Family AT1G30600 64.9 1.0e-310 1063.1
Lcy6g0875 . 60 764 Subtilisin-like Serine Gene Family AT1G32940 53.7 4.2e-220 761.9
Lcy6g0020 . 439 1148 Subtilisin-like Serine Gene Family AT1G32940 54.1 3.5e-219 758.8
Lcy6g0878 . 60 757 Subtilisin-like Serine Gene Family AT1G32940 53.1 9.3e-212 734.2
Lcy9g0103 . 60 779 Subtilisin-like Serine Gene Family AT1G32940 53.1 5.7e-209 724.9
Lcy6g0871 . 59 737 Subtilisin-like Serine Gene Family AT1G32940 53.4 1.2e-198 690.6
Lcy6g0877 . 60 695 Subtilisin-like Serine Gene Family AT1G32940 53.5 1.0e-186 651.0
Lcy6g0020 . 439 1148 Subtilisin-like Serine Gene Family AT1G32950 55.0 1.5e-217 753.4
Lcy6g0875 . 60 764 Subtilisin-like Serine Gene Family AT1G32950 54.0 1.3e-216 750.4
Lcy6g0878 . 60 757 Subtilisin-like Serine Gene Family AT1G32950 54.0 2.9e-213 739.2
Lcy9g0103 . 60 779 Subtilisin-like Serine Gene Family AT1G32950 53.2 4.9e-213 738.4
Lcy6g0871 . 56 737 Subtilisin-like Serine Gene Family AT1G32950 53.4 4.5e-198 688.7
Lcy6g0879 . 47 720 Subtilisin-like Serine Gene Family AT1G32950 50.8 5.0e-189 658.7
Lcy6g0877 . 60 695 Subtilisin-like Serine Gene Family AT1G32950 54.0 1.2e-187 654.1
Lcy6g0869 . 67 697 Subtilisin-like Serine Gene Family AT1G32950 50.5 4.5e-182 635.6
Lcy6g0020 . 383 1148 Subtilisin-like Serine Gene Family AT1G32960 54.1 8.4e-235 810.8
Lcy6g0875 . 8 764 Subtilisin-like Serine Gene Family AT1G32960 53.6 4.9e-227 785.0
Lcy6g0878 . 36 757 Subtilisin-like Serine Gene Family AT1G32960 54.3 2.2e-222 769.6
Lcy9g0103 . 36 779 Subtilisin-like Serine Gene Family AT1G32960 53.4 1.4e-218 756.9
Lcy6g0871 . 31 737 Subtilisin-like Serine Gene Family AT1G32960 53.1 3.9e-208 722.2
Lcy6g0877 . 31 697 Subtilisin-like Serine Gene Family AT1G32960 53.7 7.4e-199 691.4
Lcy6g0879 . 18 720 Subtilisin-like Serine Gene Family AT1G32960 50.6 8.2e-198 688.0
Lcy5g1477 . 1 753 Subtilisin-like Serine Gene Family AT1G62340 59.9 2.9e-257 885.6
Lcy4g0408 . 5 768 Subtilisin-like Serine Gene Family AT2G04160 63.9 1.5e-287 986.1
Lcy6g1880 . 46 787 Subtilisin-like Serine Gene Family AT2G04160 59.2 9.2e-258 887.1
Lcy6g1881 . 86 768 Subtilisin-like Serine Gene Family AT2G04160 60.9 2.3e-248 855.9
Lcy6g1894 . 26 764 Subtilisin-like Serine Gene Family AT2G04160 56.5 3.3e-247 852.0
Lcy5g1327 . 9 752 Subtilisin-like Serine Gene Family AT2G04160 56.5 6.0e-241 831.2
Lcy6g1892 . 33 775 Subtilisin-like Serine Gene Family AT2G04160 56.2 2.3e-240 829.3
Lcy6g1893 . 8 767 Subtilisin-like Serine Gene Family AT2G04160 55.4 3.3e-239 825.5
Lcy6g1869 . 5 747 Subtilisin-like Serine Gene Family AT2G04160 55.1 5.6e-239 824.7
Lcy6g1885 . 15 726 Subtilisin-like Serine Gene Family AT2G04160 54.5 2.3e-224 776.2
Lcy5g1287 . 24 595 Subtilisin-like Serine Gene Family AT2G04160 55.1 2.7e-177 619.8
Lcy2g0978 . 24 765 Subtilisin-like Serine Gene Family AT2G05920 73.5 0.0e+00 1094.7
Lcy1g0936 . 24 757 Subtilisin-like Serine Gene Family AT2G05920 56.4 2.6e-233 805.8
Lcy13g2125 . 39 774 Subtilisin-like Serine Gene Family AT2G05920 56.3 1.4e-221 766.9
Lcy6g0219 . 27 771 Subtilisin-like Serine Gene Family AT2G05920 52.1 3.8e-216 748.8
Lcy3g2248 . 31 765 Subtilisin-like Serine Gene Family AT2G05920 53.1 7.4e-212 734.6
Lcy8g1248 . 33 766 Subtilisin-like Serine Gene Family AT2G05920 51.1 3.6e-206 715.7
Lcy3g2276 . 26 776 Subtilisin-like Serine Gene Family AT2G05920 50.5 2.7e-201 699.5
Lcy4g1615 . 11 817 Subtilisin-like Serine Gene Family AT2G19170 82.4 0.0e+00 1352.8
Lcy3g2248 . 1 773 Subtilisin-like Serine Gene Family AT3G14067 63.7 1.0e-285 979.9
Lcy1g0936 . 9 757 Subtilisin-like Serine Gene Family AT3G14067 53.6 2.8e-222 769.2
Lcy2g0978 . 23 761 Subtilisin-like Serine Gene Family AT3G14067 54.0 1.3e-219 760.4
Lcy13g2125 . 10 774 Subtilisin-like Serine Gene Family AT3G14067 51.4 1.4e-213 740.3
Lcy3g2276 . 9 782 Subtilisin-like Serine Gene Family AT3G14067 50.2 2.2e-203 706.4
Lcy3g2276 . 30 784 Subtilisin-like Serine Gene Family AT3G14240 77.2 0.0e+00 1200.7
Lcy8g1248 . 34 775 Subtilisin-like Serine Gene Family AT3G14240 58.7 1.4e-245 846.7
Lcy1g0936 . 26 753 Subtilisin-like Serine Gene Family AT3G14240 52.8 1.2e-217 753.8
Lcy6g0219 . 28 767 Subtilisin-like Serine Gene Family AT3G14240 50.4 2.0e-212 736.5
Lcy2g0978 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.4e-208 723.8
Lcy3g2248 . 33 763 Subtilisin-like Serine Gene Family AT3G14240 50.7 5.3e-205 711.8
Lcy13g2125 . 41 773 Subtilisin-like Serine Gene Family AT3G14240 51.2 1.2e-204 710.7
Lcy7g1234 . 42 779 Subtilisin-like Serine Gene Family AT3G14240 50.1 1.7e-198 690.3
Lcy7g0931 . 13 718 Subtilisin-like Serine Gene Family AT3G46840 50.2 1.4e-183 640.6
Lcy8g2068 . 24 740 Subtilisin-like Serine Gene Family AT3G46850 50.5 3.6e-195 679.1
Lcy7g1237 . 9 567 Subtilisin-like Serine Gene Family AT4G00230 61.2 3.0e-200 695.7
Lcy7g1236 . 9 567 Subtilisin-like Serine Gene Family AT4G00230 57.8 2.5e-186 649.4
Lcy6g0020 . 439 1148 Subtilisin-like Serine Gene Family AT4G10510 54.6 9.0e-223 770.8
Lcy6g0875 . 56 762 Subtilisin-like Serine Gene Family AT4G10510 53.9 8.4e-221 764.2
Lcy6g0878 . 60 757 Subtilisin-like Serine Gene Family AT4G10510 52.7 6.4e-213 738.0
Lcy9g0103 . 60 779 Subtilisin-like Serine Gene Family AT4G10510 52.5 6.7e-210 728.0
Lcy6g0871 . 56 737 Subtilisin-like Serine Gene Family AT4G10510 52.0 6.9e-199 691.4
Lcy6g0877 . 60 697 Subtilisin-like Serine Gene Family AT4G10510 51.6 5.1e-186 648.7
Lcy6g0020 . 412 1148 Subtilisin-like Serine Gene Family AT4G10520 56.6 3.1e-234 808.9
Lcy6g0878 . 36 757 Subtilisin-like Serine Gene Family AT4G10520 54.9 1.9e-223 773.1
Lcy6g0875 . 32 762 Subtilisin-like Serine Gene Family AT4G10520 53.6 2.5e-223 772.7
Lcy9g0103 . 36 779 Subtilisin-like Serine Gene Family AT4G10520 52.7 1.4e-218 756.9
Lcy6g0871 . 36 737 Subtilisin-like Serine Gene Family AT4G10520 53.5 1.2e-206 717.2
Lcy6g0877 . 36 695 Subtilisin-like Serine Gene Family AT4G10520 55.2 2.2e-203 706.4
Lcy6g0879 . 21 720 Subtilisin-like Serine Gene Family AT4G10520 51.5 9.1e-202 701.0
Lcy6g0020 . 412 1148 Subtilisin-like Serine Gene Family AT4G10530 54.7 2.7e-222 769.2
Lcy6g0875 . 32 762 Subtilisin-like Serine Gene Family AT4G10530 51.7 1.1e-210 730.7
Lcy6g0878 . 36 757 Subtilisin-like Serine Gene Family AT4G10530 51.9 5.5e-207 718.4
Lcy9g0103 . 36 779 Subtilisin-like Serine Gene Family AT4G10530 51.0 6.7e-205 711.4
Lcy6g0871 . 36 737 Subtilisin-like Serine Gene Family AT4G10530 51.0 5.0e-192 668.7
Lcy6g0877 . 36 695 Subtilisin-like Serine Gene Family AT4G10530 52.4 8.8e-189 657.9
Lcy6g0020 . 383 1148 Subtilisin-like Serine Gene Family AT4G10540 53.9 2.4e-234 809.3
Lcy6g0875 . 31 764 Subtilisin-like Serine Gene Family AT4G10540 53.5 1.5e-228 790.0
Lcy9g0103 . 36 779 Subtilisin-like Serine Gene Family AT4G10540 53.2 5.6e-223 771.5
Lcy6g0878 . 36 757 Subtilisin-like Serine Gene Family AT4G10540 53.5 7.4e-223 771.2
Lcy6g0871 . 31 737 Subtilisin-like Serine Gene Family AT4G10540 51.3 2.4e-205 713.0
Lcy6g0877 . 31 695 Subtilisin-like Serine Gene Family AT4G10540 52.2 7.0e-197 684.9
Lcy6g0020 . 439 1148 Subtilisin-like Serine Gene Family AT4G10550 54.5 3.6e-224 775.4
Lcy6g0875 . 60 764 Subtilisin-like Serine Gene Family AT4G10550 53.7 8.7e-218 754.2
Lcy6g0878 . 60 757 Subtilisin-like Serine Gene Family AT4G10550 52.1 3.5e-211 732.3
Lcy9g0103 . 60 779 Subtilisin-like Serine Gene Family AT4G10550 51.7 1.9e-209 726.5
Lcy6g0871 . 56 737 Subtilisin-like Serine Gene Family AT4G10550 51.4 1.5e-198 690.3
Lcy6g0877 . 60 695 Subtilisin-like Serine Gene Family AT4G10550 51.4 1.6e-187 653.7
Lcy1g0084 . 12 834 Subtilisin-like Serine Gene Family AT4G20430 68.8 0.0e+00 1142.5
Lcy5g1974 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 78.3 6.5e-132 467.6
Lcy6g0020 . 410 1148 Subtilisin-like Serine Gene Family AT4G21630 53.1 6.8e-213 738.0
Lcy6g0878 . 30 757 Subtilisin-like Serine Gene Family AT4G21630 50.4 5.0e-200 695.3
Lcy6g0875 . 27 761 Subtilisin-like Serine Gene Family AT4G21630 50.2 1.2e-196 684.1
Lcy6g0020 . 410 1148 Subtilisin-like Serine Gene Family AT4G21640 50.9 2.0e-201 699.9
Lcy6g0020 . 402 1148 Subtilisin-like Serine Gene Family AT4G21650 52.0 3.3e-215 745.7
Lcy6g0878 . 28 757 Subtilisin-like Serine Gene Family AT4G21650 50.6 2.0e-204 709.9
Lcy8g1867 . 31 768 Subtilisin-like Serine Gene Family AT4G26330 58.5 3.2e-244 842.0
Lcy4g1615 . 9 817 Subtilisin-like Serine Gene Family AT4G30020 82.1 0.0e+00 1347.4
Lcy8g1248 . 27 775 Subtilisin-like Serine Gene Family AT4G34980 74.7 0.0e+00 1147.9
Lcy3g2276 . 21 784 Subtilisin-like Serine Gene Family AT4G34980 53.4 1.4e-229 793.5
Lcy6g0219 . 11 770 Subtilisin-like Serine Gene Family AT4G34980 51.0 2.2e-211 733.0
Lcy1g0936 . 25 753 Subtilisin-like Serine Gene Family AT4G34980 51.7 1.3e-208 723.8
Lcy2g0978 . 23 757 Subtilisin-like Serine Gene Family AT4G34980 51.5 1.7e-208 723.4
Lcy3g2248 . 21 763 Subtilisin-like Serine Gene Family AT4G34980 50.4 4.1e-202 702.2
Lcy1g1264 . 115 594 Subtilisin-like Serine Gene Family AT5G03620 57.6 3.0e-152 536.2
Lcy7g0931 . 13 546 Subtilisin-like Serine Gene Family AT5G03620 52.6 5.8e-148 521.9
Lcy7g1237 . 5 565 Subtilisin-like Serine Gene Family AT5G03620 50.3 1.2e-145 514.2
Lcy2g0820 . 291 1050 Subtilisin-like Serine Gene Family AT5G19660 80.4 0.0e+00 1286.9
Lcy1g0084 . 34 608 Subtilisin-like Serine Gene Family AT5G44530 70.6 5.2e-243 837.8
Lcy1g0235 . 29 741 Subtilisin-like Serine Gene Family AT5G45650 53.2 5.1e-219 758.4
Lcy6g0219 . 12 769 Subtilisin-like Serine Gene Family AT5G51750 73.6 0.0e+00 1164.1
Lcy1g0936 . 24 757 Subtilisin-like Serine Gene Family AT5G51750 53.1 8.2e-230 794.3
Lcy13g2125 . 39 774 Subtilisin-like Serine Gene Family AT5G51750 53.0 1.1e-221 767.3
Lcy2g0978 . 22 761 Subtilisin-like Serine Gene Family AT5G51750 51.7 4.5e-220 761.9
Lcy8g2068 . 32 558 Subtilisin-like Serine Gene Family AT5G58840 51.6 1.2e-142 504.2
Lcy7g0566 . 10 452 Subtilisin-like Serine Gene Family AT5G58840 50.3 1.0e-117 421.4
Lcy8g2068 . 54 739 Subtilisin-like Serine Gene Family AT5G59190 54.3 2.9e-202 702.6
Lcy9g0404 . 46 743 Subtilisin-like Serine Gene Family AT5G59190 50.8 6.7e-191 664.8
Lcy7g0931 . 21 720 Subtilisin-like Serine Gene Family AT5G59190 50.9 1.6e-189 660.2
Lcy12g0050 . 1 611 Subtilisin-like Serine Gene Family AT5G59190 50.1 3.9e-167 585.9
Lcy5g1327 . 4 753 Subtilisin-like Serine Gene Family AT5G59810 60.8 2.5e-263 905.6
Lcy4g0408 . 13 768 Subtilisin-like Serine Gene Family AT5G59810 59.3 1.2e-257 886.7
Lcy6g1880 . 46 787 Subtilisin-like Serine Gene Family AT5G59810 59.1 2.1e-249 859.4
Lcy6g1881 . 84 768 Subtilisin-like Serine Gene Family AT5G59810 61.3 5.3e-245 844.7
Lcy6g1894 . 1 764 Subtilisin-like Serine Gene Family AT5G59810 54.9 1.5e-239 826.6
Lcy6g1869 . 25 750 Subtilisin-like Serine Gene Family AT5G59810 55.9 1.2e-233 807.0
Lcy6g1892 . 19 775 Subtilisin-like Serine Gene Family AT5G59810 56.1 1.0e-232 803.9
Lcy6g1893 . 8 767 Subtilisin-like Serine Gene Family AT5G59810 54.3 5.7e-231 798.1
Lcy6g1885 . 20 726 Subtilisin-like Serine Gene Family AT5G59810 55.7 6.7e-224 774.6
Lcy6g1866 . 7 684 Subtilisin-like Serine Gene Family AT5G59810 50.8 5.9e-204 708.4
Lcy5g1287 . 26 593 Subtilisin-like Serine Gene Family AT5G59810 60.1 4.4e-191 665.6
Lcy1g0936 . 9 759 Subtilisin-like Serine Gene Family AT5G67360 73.0 0.0e+00 1107.0
Lcy13g2125 . 15 776 Subtilisin-like Serine Gene Family AT5G67360 65.3 2.3e-290 995.3
Lcy2g0978 . 27 762 Subtilisin-like Serine Gene Family AT5G67360 57.1 1.0e-232 803.9
Lcy6g0219 . 28 768 Subtilisin-like Serine Gene Family AT5G67360 54.7 4.4e-228 788.5
Lcy3g2248 . 13 764 Subtilisin-like Serine Gene Family AT5G67360 55.3 3.8e-224 775.4
Lcy8g1248 . 9 769 Subtilisin-like Serine Gene Family AT5G67360 51.7 1.1e-210 730.7
Lcy3g2276 . 22 779 Subtilisin-like Serine Gene Family AT5G67360 51.5 3.1e-210 729.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011865 1 1 1 0 1 1 1 1 1 1 1 1 0 1 1 0 1 0 1 1 1 1 1 1 1 1 1 2 2 0 27