Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g2068 ATGACTTCGAGAGAGGAAATGGACGAGAACCCTGAAATGAAGGGAAGTATGTGGGTTCTAGACCAGAAGCTTGATCAACCTATGGATGAAGAAGCTGGGAGACTTAGTAATATGTACAAAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTGTACGTTTTTTACAATACATTTCCTCATGGAATTTCTGATCCGGAGGATGTAATTGGAGCACTTTCATTGATTATATACTCTCTCACACTCATTCCACTCATAAAGTATGTATTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAAAGTAAAAACTATTCCAAACCAACATCGAACTGATGAGGAGCTAACAACATATAGTCGCTCTAAGTTTCATGCGCAATCATTTGCTGCTAAAACTAAAGGATGGCTTGAAAAAGGATCATCCAGGAAGAATGTGTTGCTCATTCTTGTCCTTGTTGGCACTTCTATGCTAGCTATTTCACTAGTGATATGGCTAAAGCTTGTGGCTGAACCTGCACTTTCAGTTACCTTAAACATTAAAGCTTTAGATGTAGTTGTGCTTGTTGCTGTTGTTATACTAGTAGGATTATTCAGCTTGCAACGCTATGGTACTGATAGAGTTGGTTGGCTGTTTGCCCCAGTTGTGCTACTTTGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAAAACCATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAGAAGGCGAGGGATGGATGGTTGGACGTCCCTCGGAGGGATTCTGCTGAGTATAACAGGCACAGAGGCTCTATTTGCCGATCTGGCTCATTTTCGTGTAGCAGCTATACAGATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAGGCTGCCTACCTTATGAACAATAAGGATCATGTGAATGATGTCTTCTATCGTTCAATCCCAGGGACAGCGGTGGTGGTAGTCATGCTTGTGACCACACTGCTTATGATTCTGATCATGATCTTGGTGTGGCGCTGTCATTGGATCATTGCCCTAATTTTCACCAGTTTATCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTCCCCCTTGTGATTGCTGCAACCTTTCTTATCATCATGTATGTGTGGCATTATGGTACTGTTAAACGATATGAATTTGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGGCTTGGTCCCAGTCTAGGACTAGTTCGTGTTCCTGGAATTGGACTTGTGTATACCGAGCTTGCAAGCGGCGTACCTCACATATTTTCCCATTTTATTACGAATCTGCCTGCCATCCATTCTGTTGTTGTGTTTGTCTGTGTGAAATACCTTCCAGTCTACACAGTGCCAGAGGAAGAAAGGTTTCTAGTAAAGAGGATAGGACCCAAGAATTTCCACATGTTTCGTTGCGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGATGATTTTGAGAAAAAGCTTTTTGATAGCATCTTCCTCTTTGTCAGGCTTGAATCCATGATGGAAGGTTGCTCGGATTCTGATGAGTACAGTTTGTATGGCCAGCAAACTGAGTGTTCAAGGGATGGCCTGTTGATTGGCAACAATGGAAATGCAATTTCATCCAATGTGGACATGACATTCTCATCAGTTGACTCAATTGTGCCCGTTAGATCTCCGGTGCGTTCGAATAACACAGTAAGGTCTTCTGAGCAAGCAAGCAACCATACCGATAGCGATGAGATTGAATTCTTGATTAGGTCTCGAGATGCCGGGGTGGTGCACATACTGGGGAACACTGTAATTAGGGCAAGAAGAGAATCAAGATTCTACAAGAAGATAGCTGTCGATTACATATATGCATTTCTTAGGAAGATTTGCAGGGAGAACAGTGTGATTTTCAATTGTCACTACAAGGCTGATGATCTATTTCACGGTTACCCTGTTGGATTCGGATACAATCCTGGTGAGGATACTGGTGATAAAGATAGTATCTGGGTTATAGATCAGCAGATTGACCAGCCAATGGAGGAGGAGTCTAAGCGGCTAAAAAATGCGTATCAGGAAAAGGATCACTCTTTTCTAAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTCTACGGAGATTTGGGTACTTCCCCTTTATATGTCTTCTACAACACATTCCCCGATGGAGTTGAAAATACGGAGGACTTGATAGGAGCCCTTTCATTGATTATATACTCTCTGACTCTCATTCCCCTTATCAAGTACGTATTTATTGTCTGCAAGGCAAATGACGATGGTCAAGGTGGAACATTTGCTCTATATTCATTACTATGCCGTCATGCAAAAATATTAACTATCCCTAACCAGGACCACACTGATGAGAAGCTTACTACTTATAGTCGTTCTGAGTTCCGTGAACACTCATTTGCTGCAAAAACTAAGAAATGGCTGGAAGGGCATCATTTTAAGAAACACGCAATTCTAGTTCTCGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGGATTCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCGTACAAAAATAAGTAGTGATGTAGCTGTTATTGTCGCTATTGTCATACTTATTGTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTTAGTTGGCTTTTCGCCCCAGTAGTTTTTCTATGGTTCACCTTAATTGGAGGCATTGGCATATTCAACATCTGGAAGCATGATAGCAGTGTCCTGAGAGCCTTTTCTCCTATATATATATATCAGTACTTTAAAAGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGGTCATGCTTAGTATAACAGGAACTGAAGCACTTTTCGCAGACCTATCCCATTTTCCAGTTTCCTCCATACAAATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGTTGCCTATCTCATGAAAAACCCAGAGTATGTTGCCGGTGCCTTCTATCATTCAATTCCAGGGACAGCAGTGGTTATAGTGATGTTGGTAACCACATTCCTCATGGCTTTAATAATGATATTAGTGTGGCACTCCCACTGGACTCTAGTCCTGCTCTTCACTTGCTTATCACTGATTGTGGAGGGTACCTACCTCTCGTCAGTTATCCAAAAGGTTTACCAAGGTGGGTGGGTTCCTTTGGTTATAGCGGCAGCATTTTTCATCATAATGTACATTTGGCATTATGGTACAGCTAAACGTTATGAGATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTGAGGGTGCCTGGGATAGGACTTGTGTACACAGAACTTACAAGTGGAGTCCCCCACATCTTTTCACACTTCATCACAAATTTACCTGCCATTCATTCGGTTGTGGTTTTTGTCTGTTTGAAGTGTCTGCCTGTCCGCACTGTCCCGGAAGAAGAGAGATTTCTGGTAAAACGGATTGGACCTAAGAATTTCCGCATGTTTCGCTGTGTAGCTAGATATGGTTACAAAGACCTCCACAAGGAAGATGATGATTTTGAGAAGAAACTCTTTGATAGCCTCTTCTTGTTTGTTCGACTCGAGTCCTTGATGGATGGTGGGTCTTCAGATTCGGATGTGTCTAGCATACTTGATCAGCAAAATGAAACTATTACAGAGATTCCATTGAGCAAACTTAATTCAACTTCCACATCTATGGAATCATTAGGCCTGCCAACGGCAGACTCAATTGAGCTTGTCACTTCTCCATTGCATCAGAACCAAACCATCATAACACCCAATCAAGAAAACAGTCGGATTGAGACAGATGAATTAGGGTTCTTGGTTAGCAGTAAAAGTGTCGGAGTTGTACACATACTTGGAAATACAGTAATGAAAGCTAGGAGGGAATCCAGATTCTACAAAAAGTTTGCGATCGATTATATATATGCATTTCTTAAAAAGATCTGCAGGGAGAACAGCGTGATGTACAATGTTCCCCATGAGAGTTTGCTTAACGTTGGGCAAACATTCTATGTATAA 4230 41.84 MTSREEMDENPEMKGSMWVLDQKLDQPMDEEAGRLSNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVIGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHAQSFAAKTKGWLEKGSSRKNVLLILVLVGTSMLAISLVIWLKLVAEPALSVTLNIKALDVVVLVAVVILVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDKTILRAFSPVYIYRYFRRRGMDGWTSLGGILLSITGTEALFADLAHFRVAAIQIAFTVVVFPCLLLAYSGQAAYLMNNKDHVNDVFYRSIPGTAVVVVMLVTTLLMILIMILVWRCHWIIALIFTSLSLIVECSYFSAVLFKVDQGGWVPLVIAATFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTECSRDGLLIGNNGNAISSNVDMTFSSVDSIVPVRSPVRSNNTVRSSEQASNHTDSDEIEFLIRSRDAGVVHILGNTVIRARRESRFYKKIAVDYIYAFLRKICRENSVIFNCHYKADDLFHGYPVGFGYNPGEDTGDKDSIWVIDQQIDQPMEEESKRLKNAYQEKDHSFLKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLIPLIKYVFIVCKANDDGQGGTFALYSLLCRHAKILTIPNQDHTDEKLTTYSRSEFREHSFAAKTKKWLEGHHFKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGRTKISSDVAVIVAIVILIVLFSMQRYGTDKVSWLFAPVVFLWFTLIGGIGIFNIWKHDSSVLRAFSPIYIYQYFKRGGKAGWTSLGGVMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYSGQVAYLMKNPEYVAGAFYHSIPGTAVVIVMLVTTFLMALIMILVWHSHWTLVLLFTCLSLIVEGTYLSSVIQKVYQGGWVPLVIAAAFFIIMYIWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELTSGVPHIFSHFITNLPAIHSVVVFVCLKCLPVRTVPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKEDDDFEKKLFDSLFLFVRLESLMDGGSSDSDVSSILDQQNETITEIPLSKLNSTSTSMESLGLPTADSIELVTSPLHQNQTIITPNQENSRIETDELGFLVSSKSVGVVHILGNTVMKARRESRFYKKFAIDYIYAFLKKICRENSVMYNVPHESLLNVGQTFYV 1409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 43789806 43806188 + Maker00036334 Lcy5g2068 633883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g2068 1409 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 741 1061 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy5g2068 1409 Pfam K+ potassium transporter integral membrane domain 357 449 IPR053951 -
Lcy5g2068 1409 Pfam K+ potassium transporter integral membrane domain 1062 1156 IPR053951 -
Lcy5g2068 1409 Pfam K+ potassium transporter integral membrane domain 52 356 IPR053951 -
Lcy5g2068 1409 Pfam K+ potassium transporter integral membrane domain 754 1061 IPR053951 -
Lcy5g2068 1409 Pfam K+ potassium transporter C-terminal domain 463 692 IPR053952 -
Lcy5g2068 1409 Pfam K+ potassium transporter C-terminal domain 1168 1406 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g2068 Lcy-Chr5:43789806 Lcy7g1064 Lcy-Chr7:11363119 1.80E-163 dispersed
Lcy5g2068 Lcy-Chr5:43789806 Lcy10g0268 Lcy-Chr10:4419899 6.62E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g2068 K03549 - mdm:103435296 917.916