Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy5g2218 | ATTTCTCTCTTACTTGCGTTGATCGTTGTTCTGTGTTCATCTGAATCCTTCTATCCTTCGTATTTCTTGTGTTTCTGCTGTTTCAGTTCTGTTCTGAAGCCGTGTGTGTGTTTTCAATCATGGGTTCTCGCTAATCTTGCTGTTCCTGGTCGGTGGGACTGTTCTGTCAATGCCCATTTGCTTTCACTTGGTCTGAAACGCTCAGAATGCAGTTTGGGAATATGGAAAAGGGGAAAAAAATCCGTTCACAAAGCTTCTTGTTCACAAAATATTCCACTCAACATGGAAGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGGAAGACTTCTATGCTACAAACAGGATTGGACTGGCGGACTTCGCTCTGGTATCAGGATCTTGGCCCCAACAACCTACATATTCTTTGCTTCGGCGATTCCAGTTATATCGTTCGGGGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACGGCAGTTTGTGGCATCATTCACTCAATCTTTGGGGGACAGCCTCTGCTCATCCTTGGGGTCGCTGAACCAACTGTTTTGATGTATACATTTATGTTTGACTTTGCCAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACGGGATGGGTATGTGTATGGACAGCCATTTTGCTTTTCTTGCTGGCTGTATTGGGTGCATGCTCCCTGATCAATAGGTTTACACGTCTTGCTGGAGAACTGTTTGGTCTGCTAATTGCTATGCTCTTTATGCAGCAGGCGATACGTGGTGTTGTGGAGGAATTCGGTGTACCCCAGAGGGAAAATCCTAATCAGGTGGGGCTACAAGCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTCGGGCTTCTACTAACTGCACTCAAAAGCCGCAAGGCTAGATCATGGCGCTATGGAACTGGTTGCCTACGGGGCTTTATAGCGGATTATGGAGTTCCACTTATGGTACTCGTATGGACAGCCTTATCATACATTCCAGTTAACAATGTCCCGCATGGGATTCCAAGGAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCTTACTCAAATTGGACGGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACTATGATAGCAGTTCTTTACTACTTTGACCACAGTGTTGCATCTCAACTTGCCCAACAGAAGGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTTCTCCTAGGTTTCCTTGTTATACTGTGCGGACTTATAGGGATTCCACCTTCCAATGGTGTAATTCCTCAATCTCCGATGCACACAAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAACAAGCTGGTAGCAGCGGCACGTCAAAGTTTCCGGAAAAAATCAAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATAATGAGATGCAGACTCCTTTAATTTACCAAAATCCACCAGCTGCGGGGCTGAAGGAGTTGAAAGATTCCACGATCCAACTAGCTTCAAGAACTGGCTACATCGATGCACCTGTTGATGAAACTATTTTCGATGTGGATAAAGATGTTGATGATCTTCTGCCAGTGGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAATAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTCCTAAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTTGCTTTCATGGCAATCGAGAGCTTGCCCGGAAATCAGTTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTCCTAGAAACTGTCCCCTTCAAAACAATTGCTACCTTCACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGTTTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTTGTCCCCGTGCGGCAGTATCTGCTCCCCAGGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCTGCTGAATATGAGGAAGCCCCTGCAATTGCTTATAATCCGTCATTCGAAGATCGAATGGGAAGAACTCCCAACATTGACGACGGTGAAATACTTGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGACTTACGCAGAGTTCGAAAGTGACAAGCTCAACCCCAACTTCCCTGGAGGGCATCAAACCTACCTACAGCCCACAGATACCACAGAAACTGTACAGTCCACGGATCAATGAGCTGAGAAGAGAGAGAAGTTCTCTATCTCCTGGAAAAGGACTTGACTTTAAGCTAAGTCCAAGTCCTAGCTCAGAACCAGGGCCAGGACCAGCACCAGGACCATCCTTTAGAAATTAG | 2442 | 45.13 | ISLLLALIVVLCSSESFYPSYFLCFCCFSSVLKPCVCFQSWVLANLAVPGRWDCSVNAHLLSLGLKRSECSLGIWKRGKKSVHKASCSQNIPLNMEETFFPFRGIKNDIRGRLLCYKQDWTGGLRSGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTAVCGIIHSIFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGVPQRENPNQVGLQAPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLVWTALSYIPVNNVPHGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAAARQSFRKKSNLSQLYRNMQEAYNEMQTPLIYQNPPAAGLKELKDSTIQLASRTGYIDAPVDETIFDVDKDVDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPRFFKGAHLQDLDAAEYEEAPAIAYNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRLTQSSKVTSSTPTSLEGIKPTYSPQIPQKLYSPRINELRRERSSLSPGKGLDFKLSPSPSSEPGPGPAPGPSFRN | 813 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 45181678 | 45188405 | - | Maker00036771 | Lcy5g2218 | 634033 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy5g2218 | 813 | PANTHER | ANION EXCHANGE PROTEIN | 85 | 732 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Lcy5g2218 | 813 | FunFam | probable boron transporter 2 | 112 | 154 | - | - | |
Lcy5g2218 | 813 | MobiDBLite | consensus disorder prediction | 739 | 813 | - | - | |
Lcy5g2218 | 813 | Pfam | HCO3- transporter integral membrane domain | 296 | 466 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lcy5g2218 | 813 | Pfam | HCO3- transporter integral membrane domain | 554 | 696 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lcy5g2218 | 813 | Pfam | HCO3- transporter integral membrane domain | 101 | 274 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lcy5g2218 | 813 | MobiDBLite | consensus disorder prediction | 798 | 813 | - | - | |
Lcy5g2218 | 813 | Gene3D | Helical hairpin bin | 112 | 154 | - | - | |
Lcy5g2218 | 813 | MobiDBLite | consensus disorder prediction | 739 | 768 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g0381 | Lcy-Chr12:4628462 | Lcy5g2218 | Lcy-Chr5:45181678 | 0 | dispersed | |
Lcy13g1757 | Lcy-Chr13:36506590 | Lcy5g2218 | Lcy-Chr5:45181678 | 2.12E-261 | dispersed | |
Lcy5g2218 | Lcy-Chr5:45181678 | Lcy12g0614 | Lcy-Chr12:7500742 | 3.13E-274 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy5g2218 | K24194 | - | csv:101203606 | 1335.86 |