Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g2290 ATGGACCCCGGAGGGAAATTAGACCATAGGGTTGGGCCAAGGCCAAAGGGATTGGGCCTTCGGCCTCGGCCCGCTTGTGCAGGCCGAGTCTCCTCCCCTCTGCTCGGTCCCTGGAGTCCTTGGGTTGTCCTGGTTCAATCTGCAGCTTTGCATCGCATCTATCGATCTCTCTGGATCATGGCGCCGGTTTTGTCTCGGTTACTTCTCCGTCGGAATGTTCAGACATCATTTTTTCGCGCCTCCATCGGATTGAACTTTTGCAGCAGAGAAATTCATTCTTTACTTTTTTCATCGGTAGAAGTGGAGCAAATTTCAGGTTCTAAGCCAGGAGAAGTTCACAACTTGGGAATGCTGACACAGCATGTGTTTATTTTAGTGCAGGGTAAATGGATTCGATCTTCTGGTTGGAATACTATTCTGGATCCTTTAAATGGAGAACCATTCATTAAAGTTGCCGAAGTCGATGAAACAGAAATTCAGCCATTTGTGAAGAGTCTGAACAAATGCCCCAAGCATGGCTTACATAATCCTTTCAAATCACCCGAGAGATACCTTATGTTTGGAGATATATCTTCCAAGGCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTTTTTGCAAGGTTGATTCAAAGAGTTTCTCCAAAAAGTTATCAACAAGCTTGTGCTGAAGTAAATGTTACTGTAAAATTTCTACGGAACTTCTCTGGTGATCAGGTTCGCTTCTTGGCAAGGTCCTTTGCCATACCTGGTGATCATCTTGGACAACACAGTCATGGTTTCCGTTGGCCTTATGGACCTGTTGCAATCATCACTCCTTTCAACTTTCCCTTGGAAATTCCTGTACTTCAGCTCATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCATCATTGTGGGCTACCTCTAGAAGATTTGGATTTTATAAATTGTGATGGGAAGACAATGAACAGGTTACTGCTGGAGGCAAATCCATCTATGACTCTTTTCACTGGTAGCTCAAGGGTGGCAGATAAGTTGGCCGTCGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAATCTTAGGACCAGATGTTCAAGAGGAAGATTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAGAAATGCTCAGCACAGTCGATACTGTTCATGCATGAGAATTGGTCGGCAACTTCACTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACTGATTTAACGATTGGCCCAGTCCTTACATTCACTAATGAAATGATACTAGATCACATGAATAAGTTGCTCAAGATACCAGGGGCAAAGTTACTATTTGGAGGCGAACCTCTTAAAAACCATTCCATTCCACCGATATATGGTGCTATAAAACCCACTGCAGTATATATTCCGCTTGAAGAAATGATGAAAGACGACAATTATGAGCTTGTGACCAAAGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAAAGATCAACTGTCAACTGTGTTGGATGCTCTTGAGCGTATGCATGCTCATCTGACCGCGGCTGTGGTTTCAAATGACCCTCTATTTTTGCAGGAAGTAATTGGGAATACTGTGAACGGAACGACATATGCTGGTTTACGAGCAAGAACAACTGGAGCTCCACAAAACCATTGGTTTGGACCAGCGGGAGATCCCAGAGGTGCAGGTATCGGGACCCCGGAAGCGATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGACAATGGCCCATTGCCCTCGCACTGGACAATCCCACCATCGACTTGA 1875 44.0 MDPGGKLDHRVGPRPKGLGLRPRPACAGRVSSPLLGPWSPWVVLVQSAALHRIYRSLWIMAPVLSRLLLRRNVQTSFFRASIGLNFCSREIHSLLFSSVEVEQISGSKPGEVHNLGMLTQHVFILVQGKWIRSSGWNTILDPLNGEPFIKVAEVDETEIQPFVKSLNKCPKHGLHNPFKSPERYLMFGDISSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAIPGDHLGQHSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNRLLLEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKIKDLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTAVYIPLEEMMKDDNYELVTKEIFGPFQIITEYKKDQLSTVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDNGPLPSHWTIPPST 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45867639 45874936 - Maker00036262 Lcy5g2290 634105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g2290 624 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 115 618 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Lcy5g2290 624 Pfam Aldehyde dehydrogenase family 138 565 IPR015590 GO:0016491(InterPro)
Lcy5g2290 624 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 113 373 IPR016162 GO:0016491(InterPro)
Lcy5g2290 624 MobiDBLite consensus disorder prediction 1 24 - -
Lcy5g2290 624 MobiDBLite consensus disorder prediction 1 15 - -
Lcy5g2290 624 FunFam probable aldehyde dehydrogenase 116 373 - -
Lcy5g2290 624 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 398 409 IPR016160 GO:0016491(InterPro)
Lcy5g2290 624 SUPERFAMILY ALDH-like 124 592 IPR016161 GO:0016491(InterPro)
Lcy5g2290 624 FunFam Aldehyde dehydrogenase 12 381 569 - -
Lcy5g2290 624 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 374 565 IPR016163 GO:0016620(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g2290 K00294 - csv:101214440 1036.94