Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy5g2290 | ATGGACCCCGGAGGGAAATTAGACCATAGGGTTGGGCCAAGGCCAAAGGGATTGGGCCTTCGGCCTCGGCCCGCTTGTGCAGGCCGAGTCTCCTCCCCTCTGCTCGGTCCCTGGAGTCCTTGGGTTGTCCTGGTTCAATCTGCAGCTTTGCATCGCATCTATCGATCTCTCTGGATCATGGCGCCGGTTTTGTCTCGGTTACTTCTCCGTCGGAATGTTCAGACATCATTTTTTCGCGCCTCCATCGGATTGAACTTTTGCAGCAGAGAAATTCATTCTTTACTTTTTTCATCGGTAGAAGTGGAGCAAATTTCAGGTTCTAAGCCAGGAGAAGTTCACAACTTGGGAATGCTGACACAGCATGTGTTTATTTTAGTGCAGGGTAAATGGATTCGATCTTCTGGTTGGAATACTATTCTGGATCCTTTAAATGGAGAACCATTCATTAAAGTTGCCGAAGTCGATGAAACAGAAATTCAGCCATTTGTGAAGAGTCTGAACAAATGCCCCAAGCATGGCTTACATAATCCTTTCAAATCACCCGAGAGATACCTTATGTTTGGAGATATATCTTCCAAGGCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTTTTTGCAAGGTTGATTCAAAGAGTTTCTCCAAAAAGTTATCAACAAGCTTGTGCTGAAGTAAATGTTACTGTAAAATTTCTACGGAACTTCTCTGGTGATCAGGTTCGCTTCTTGGCAAGGTCCTTTGCCATACCTGGTGATCATCTTGGACAACACAGTCATGGTTTCCGTTGGCCTTATGGACCTGTTGCAATCATCACTCCTTTCAACTTTCCCTTGGAAATTCCTGTACTTCAGCTCATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCATCATTGTGGGCTACCTCTAGAAGATTTGGATTTTATAAATTGTGATGGGAAGACAATGAACAGGTTACTGCTGGAGGCAAATCCATCTATGACTCTTTTCACTGGTAGCTCAAGGGTGGCAGATAAGTTGGCCGTCGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAATCTTAGGACCAGATGTTCAAGAGGAAGATTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAGAAATGCTCAGCACAGTCGATACTGTTCATGCATGAGAATTGGTCGGCAACTTCACTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACTGATTTAACGATTGGCCCAGTCCTTACATTCACTAATGAAATGATACTAGATCACATGAATAAGTTGCTCAAGATACCAGGGGCAAAGTTACTATTTGGAGGCGAACCTCTTAAAAACCATTCCATTCCACCGATATATGGTGCTATAAAACCCACTGCAGTATATATTCCGCTTGAAGAAATGATGAAAGACGACAATTATGAGCTTGTGACCAAAGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAAAGATCAACTGTCAACTGTGTTGGATGCTCTTGAGCGTATGCATGCTCATCTGACCGCGGCTGTGGTTTCAAATGACCCTCTATTTTTGCAGGAAGTAATTGGGAATACTGTGAACGGAACGACATATGCTGGTTTACGAGCAAGAACAACTGGAGCTCCACAAAACCATTGGTTTGGACCAGCGGGAGATCCCAGAGGTGCAGGTATCGGGACCCCGGAAGCGATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGACAATGGCCCATTGCCCTCGCACTGGACAATCCCACCATCGACTTGA | 1875 | 44.0 | MDPGGKLDHRVGPRPKGLGLRPRPACAGRVSSPLLGPWSPWVVLVQSAALHRIYRSLWIMAPVLSRLLLRRNVQTSFFRASIGLNFCSREIHSLLFSSVEVEQISGSKPGEVHNLGMLTQHVFILVQGKWIRSSGWNTILDPLNGEPFIKVAEVDETEIQPFVKSLNKCPKHGLHNPFKSPERYLMFGDISSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAIPGDHLGQHSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNRLLLEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKIKDLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTAVYIPLEEMMKDDNYELVTKEIFGPFQIITEYKKDQLSTVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDNGPLPSHWTIPPST | 624 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 45867639 | 45874936 | - | Maker00036262 | Lcy5g2290 | 634105 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy5g2290 | 624 | PANTHER | ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE | 115 | 618 | IPR044638 | GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER) | |
Lcy5g2290 | 624 | Pfam | Aldehyde dehydrogenase family | 138 | 565 | IPR015590 | GO:0016491(InterPro) | |
Lcy5g2290 | 624 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 113 | 373 | IPR016162 | GO:0016491(InterPro) | |
Lcy5g2290 | 624 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lcy5g2290 | 624 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Lcy5g2290 | 624 | FunFam | probable aldehyde dehydrogenase | 116 | 373 | - | - | |
Lcy5g2290 | 624 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 398 | 409 | IPR016160 | GO:0016491(InterPro) | |
Lcy5g2290 | 624 | SUPERFAMILY | ALDH-like | 124 | 592 | IPR016161 | GO:0016491(InterPro) | |
Lcy5g2290 | 624 | FunFam | Aldehyde dehydrogenase 12 | 381 | 569 | - | - | |
Lcy5g2290 | 624 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 374 | 565 | IPR016163 | GO:0016620(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy5g2290 | K00294 | - | csv:101214440 | 1036.94 |