Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0134 ATGGCGGCCGGCCTCTCCGCCGCCTTAGGGCCCAAACCACTCCATCTCTTCCTAACTTCCTCCAATCTCTCTCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTTCAGTCCTCCGGAGCAGTAGAATCCAATGGAAGATGCGGAGAAAAACGCTGCTCACCGTCTGTGTGCTCGTTGAGGATCAGAATAGTTCCGGCGAGGTGGAGAATCTCGCCAATGAAGGATCGCCGATTGTAGTCCCTCAGATCCCGTCGCCTCATGGCGGAGAGATTCCTTTCTCAGAAATGTTCGGTACATTTTCTCTATCCGTTGGTGCCGCTGTCGGCATGGAGTTTTGGGCAAGATGGGCGCATAGGGCACTCTGGCACGCTTCCTTGTGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAACTGAACGATGTCTTCGCCATTATCAACGCCGTGCCCGCCATAGCTCTTCTCTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACAGTTTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCCGTGGGTCCCATTGCCAACGTGCCCTATTTCAGAAAGGTTGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCCTACGGGCTGTTTTTGGGTCCGAAGGAATTAGAGGAAGTGGGAGGCTTAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATCAACGGCCACAAAATCAATCAACGGTTCTTGA 804 52.36 MAAGLSAALGPKPLHLFLTSSNLSPKPRTPFLFPPSVLRSSRIQWKMRRKTLLTVCVLVEDQNSSGEVENLANEGSPIVVPQIPSPHGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKSTATKSINGS 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1189443 1192333 + Maker00002775 Lcy6g0134 634578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0134 267 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 87 259 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Lcy6g0134 267 Pfam Fatty acid hydroxylase 106 234 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1621 Lcy-Chr12:36508051 Lcy6g0134 Lcy-Chr6:1189443 2.53E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0134 K15746 - csv:101212140 474.552