Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0303 ATGACCCAGTTGCTCAATCTTGCTCTTGGAGTGGTTGCAGTTGCAGTTTTGGTTATTCTTCTTCTTGTCTTCATGAACAGAAGGGGAAAGGGGAAGGATGAATACAATGACATTGAGAGGAGGCAGCAGAGAGAGAAGGGGGAAGAAGAGAGAGAAGAATTGGTCACTTTTCAAGGTGGGCAGGACCTTACCATTGTGGATATATTGGAAGCTCCTGGGGAAGTCATTGGAAAAGCCAACCATGGAACTTTGTATAAGGCCTATTTGCAGGGAAGCAGCACAGTGAGGCTGCTGAGGTTTCTGAGGCCAGTTTGTACTACTGGGCTTGAAGACTTTGTCAGTGAGATTGAGTTTTTGGGCTCCATTAGGCATCCAAATTTGGTGCCTCTTTTGGGATTCTATTCTGGTCCAAGAGCAGAGAAGCTTCTCATTCATCCTTTTTACAGGAGAGGAAATCTGGCTGAGTTCATTAGAGATGGGAATGGCGACTCGCACCGATGGGGAGTAATAAACAAGATCTCGGTTGGTATAGCGAAAGGGTTGGATCATCTCCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTACAGTCGAAAAATGTTCTTTTGGATCGAAACTATGAACCGTATATCTCCGATTTCGGCCTACATTTACTGTTGAATTCCTCTTCTGCACAAGAGGTACTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAAGATGCAACTGAGGAAACTGATATCTATAGCTATGGGGTGATCTTACTCGAGTTACTGTCCGGGAAGGAACCGATCAACGAAAAGCCGACTCCTGATGAAGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATTTGTTTCATCCAGAAATACTTCTATATAGCAGCATTGATGGAAACCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGGAAGCTCAACGAAATCGGAACATGA 1065 43.85 MTQLLNLALGVVAVAVLVILLLVFMNRRGKGKDEYNDIERRQQREKGEEEREELVTFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTTGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAEFIRDGNGDSHRWGVINKISVGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRNYEPYISDFGLHLLLNSSSAQEVLEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPTPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2818578 2820716 - Maker00002853 Lcy6g0303 634747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0303 354 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy6g0303 354 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy6g0303 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 20 353 IPR052451 -
Lcy6g0303 354 SUPERFAMILY Protein kinase-like (PK-like) 73 349 IPR011009 -
Lcy6g0303 354 Gene3D Transferase(Phosphotransferase) domain 1 149 354 - -
Lcy6g0303 354 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1429 Lcy-Chr12:32432512 Lcy6g0303 Lcy-Chr6:2818578 4.73E-88 dispersed
Lcy6g0303 Lcy-Chr6:2818578 Lcy7g1037 Lcy-Chr7:11061369 1.99E-59 dispersed
Lcy6g0303 Lcy-Chr6:2818578 Lcy5g0069 Lcy-Chr5:797078 2.98E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66009 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0303 - - - 0.0