Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0303 | ATGACCCAGTTGCTCAATCTTGCTCTTGGAGTGGTTGCAGTTGCAGTTTTGGTTATTCTTCTTCTTGTCTTCATGAACAGAAGGGGAAAGGGGAAGGATGAATACAATGACATTGAGAGGAGGCAGCAGAGAGAGAAGGGGGAAGAAGAGAGAGAAGAATTGGTCACTTTTCAAGGTGGGCAGGACCTTACCATTGTGGATATATTGGAAGCTCCTGGGGAAGTCATTGGAAAAGCCAACCATGGAACTTTGTATAAGGCCTATTTGCAGGGAAGCAGCACAGTGAGGCTGCTGAGGTTTCTGAGGCCAGTTTGTACTACTGGGCTTGAAGACTTTGTCAGTGAGATTGAGTTTTTGGGCTCCATTAGGCATCCAAATTTGGTGCCTCTTTTGGGATTCTATTCTGGTCCAAGAGCAGAGAAGCTTCTCATTCATCCTTTTTACAGGAGAGGAAATCTGGCTGAGTTCATTAGAGATGGGAATGGCGACTCGCACCGATGGGGAGTAATAAACAAGATCTCGGTTGGTATAGCGAAAGGGTTGGATCATCTCCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTACAGTCGAAAAATGTTCTTTTGGATCGAAACTATGAACCGTATATCTCCGATTTCGGCCTACATTTACTGTTGAATTCCTCTTCTGCACAAGAGGTACTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAAGATGCAACTGAGGAAACTGATATCTATAGCTATGGGGTGATCTTACTCGAGTTACTGTCCGGGAAGGAACCGATCAACGAAAAGCCGACTCCTGATGAAGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATTTGTTTCATCCAGAAATACTTCTATATAGCAGCATTGATGGAAACCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGGAAGCTCAACGAAATCGGAACATGA | 1065 | 43.85 | MTQLLNLALGVVAVAVLVILLLVFMNRRGKGKDEYNDIERRQQREKGEEEREELVTFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTTGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAEFIRDGNGDSHRWGVINKISVGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRNYEPYISDFGLHLLLNSSSAQEVLEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPTPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2818578 | 2820716 | - | Maker00002853 | Lcy6g0303 | 634747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0303 | 354 | ProSiteProfiles | Protein kinase domain profile. | 70 | 354 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy6g0303 | 354 | Pfam | Protein tyrosine and serine/threonine kinase | 74 | 349 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy6g0303 | 354 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 20 | 353 | IPR052451 | - | |
Lcy6g0303 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 349 | IPR011009 | - | |
Lcy6g0303 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 354 | - | - | |
Lcy6g0303 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 147 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g1429 | Lcy-Chr12:32432512 | Lcy6g0303 | Lcy-Chr6:2818578 | 4.73E-88 | dispersed | |
Lcy6g0303 | Lcy-Chr6:2818578 | Lcy7g1037 | Lcy-Chr7:11061369 | 1.99E-59 | dispersed | |
Lcy6g0303 | Lcy-Chr6:2818578 | Lcy5g0069 | Lcy-Chr5:797078 | 2.98E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66009 | None | None | None | None | Lcy | PK |
Pathway information
