Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0314 ATGAAAATTACGAGGGTCTTTTTGCAATTAAAGCAAAATGTGAGAACTTCCAGGCTCCGAAAGGCAAAGGGTACTTTGCCCGGTGCTGCGACAGAAGCTCGCATCTCTTTATCTGAGCTGAAATTTATGGAAATTACTGGGGAAACAACTGTGGGGGATTCTTGTGTTGGCATGTCTTGGGGCGTCAAGCCTTATAAGTCTGTAGTTGCCATGAGCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCCCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCGGTTGAACTCTATAACATTCTTCAACGCCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAACACAAGAGAAGGATCCAGATGACAATTTCAGTTTCTAGGACTTTGAGTGGGGGTGGCCAGGCACATAATCTATTTCCTATGTATGTCATCTTGGGAAGATTAGTCTCGGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAGTCGAGCTTGTCTTTTAACTGGCATCAACAGAGTGGAACGCAATTCTCAGGTTATTGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCTACAAATACTTTATCCGGAGTAGATTCAGTTGATGGGCCTTTATACATGGCATCTGTTCCTGAGGTAGCAGTTGCAGGTTACTGCCTATGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCGACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTTCAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTACGATTCATACACGTACAGTGAAATACCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCACGAAGACTGATGTTTGGCGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAAACATTCTTCTTGTGCTCAAGGCCTCTCAGACGCAAAAAAGTTAAGAACGTAGTTCAAAGTGCAAAGCACGTACATCCTTTTGTTGTAGAGTCAGAATATTCGGACAAGGCAGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCACTCTGCATTCATCTAATGATCCTGACTGCGTACAATCAATGTCAGGGCATAATATTGCGCCAACTATGCTTCAATTTGCGAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCAAGACAGTATCTGTACCCTCTTAAGGAAGAGACAGTTCTTTCACTCCCACAGAGCTCAGCACATGTCACGAAGCCAATGGCATTGGAACAAGTTTTATCGGATCGAGACAGTGAAGATGAAGTTGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGATGTAACCAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGCCATATTCCCTGGGCTTGTGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTGCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATCATTCTTGAAAGAATACATAGTGAAGCTTCCGATCCCAAAAGCTGA 2088 41.95 MKITRVFLQLKQNVRTSRLRKAKGTLPGAATEARISLSELKFMEITGETTVGDSCVGMSWGVKPYKSVVAMSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISVSRTLSGGGQAHNLFPMYVILGRLVSDIAVAEFSGVYRFSRACLLTGINRVERNSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSTNTLSGVDSVDGPLYMASVPEVAVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIIADGIDPKQQTFFLCSRPLRRKKVKNVVQSAKHVHPFVVESEYSDKADDAQSSKGEKAQISGFLSTTLHSSNDPDCVQSMSGHNIAPTMLQFAKTRKLSIERADPRQYLYPLKEETVLSLPQSSAHVTKPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHSEASDPKS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2952162 2968846 - Maker00002806 Lcy6g0314 634758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0314 695 CDD VEFS-box_EMF2-like 572 686 - -
Lcy6g0314 695 Pfam VEFS-Box of polycomb protein 568 681 IPR019135 -
Lcy6g0314 695 PANTHER POLYCOMB GROUP PROTEIN 82 694 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Lcy6g0314 695 CDD ZnB-Zn_EMF2-like 359 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0314 Lcy-Chr6:2952162 Lcy6g2141 Lcy-Chr6:45282938 1.46E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0314 - - - 0.0