Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0363 ATGGCGGAGGCTGAATTGGAGCGGGGCGAGACCAATTGCGGCCTTACTTCCATGGATTCCACTGAGTCGCGATGGGTGTTTCAGGATGAGGACCAATCGGAGATCGACGACGAGGACGACGAGGACGAGGACGAGAATGCAGGGCGGCATCGTATGGATTTGGAATCTGAGGAAGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCGCGGATTGATTCCTTCGATGTCGAAGCCCTCGAGGTCCCTAGTGCGCAGAGACATGAATACGAGTGTGATATGAAGTTAGCTGAGCATTATTGGTTATCTGCAGATTCTGAGTTGCATGTTTTACAAGACTTCAGCGTGGGAAAAAAAATTACTCTCGCTTTTCAGACCCTTGGGGTTGTATTTGGTGATGTTGGGACAAGTCCTCTGTATACCTTCAGTGTCATGTTCAATAAAGTTCCTATTAATGGAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTTCTCCCAAATCAACTTCCTTCGGATACCCGAATATCAAGTTTCAGGTTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACTTTAAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCAATGGTAATAGCTGATGGAGTTGTCACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGACGAGGTTGTGATGATCTCAGTTGGCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGGACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTGTTCATTTGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATATCAGTGTCTTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGCTGTCTTTTATGTGCTACAGGTCATCAGCCAGGTGCTACAAGTGCACCCTCAATCAACAATCTCTTTATTTCATCTACATTGATTCCCAGGCCTGAGGATTTTGCAAGGTTTGTTCTGGATCCTGAGAACCTGCTAGGAACAACATTGGAGTCTCACCAGTTGGCAGCATCCATAGCTTGCTTTGAGTTTGAGCATATTCTTGGGAAGAACTTTATTGACATGCTTGACTTCTCTTCTCTCCTTTTGATTCTTTTGGATGCATCTCTAATGTCTAAGGTGAGGATTGAAGGGTTCGGTCTCTGCACTATTCTTGATGCTTTTGTCAACAACCGACCTTCTTTCTACACACCCTTTTTCTCAAGATGCTTTGCTGGCCAAAAATTCCAAGCATGGAGATTCTGTAACTCTCTTATTTTATTTCTGATAACCAATTACCAGGTTCGGAGGCAATGTTTGCAGATCTTTGTTATTTCTCTGTGCGGTCAATACAGTGAATGTTTGCAGCTTACATTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAATCAAAATGGAGCTGAGCACGTTTTTTTTAATTCTGTTCCCAAAAGTGCCTTCTGGCCAGTTTTTCTCATTGCTAATGTTGCTGCATTAATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCATGTATAAAACAATCAACAGCTCTTGGTTGTTTTCCTCGTCTTAAGATTGTTCACACATCTAGGAAATTCATGGGGCAAATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAACGCTTATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTTACCATTGTCATGCTTCTTATATGGCAGATAAATATTATGATCGTGATGGGTTTTGCAATGATCTTTCTTGGGATAGAACTGATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATCTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTATCGATGGATGTAATGCGGGAACTTGGGTGCAATCTTGGGACAATCAGAGCTCCTGGCATCGGGTTACTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAATTCATTCAATGATCATCTTTGTCTGTATCAAGTATGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGCCCGAAAAGAAAATCATCAGGCATTTGAGCAGCTCTTAATTGAAAGCCTCGAGAAATTCATCCGTCGAGAGGCACAAGAAAGATCATTAGAGAGTGATGGAGATGATGATACTGATTCCGACGAGATCCACAGCTCGCGACTTCTCATAGCTCCCAATGGAAGTGTCTATTCACTTGGCATGCCTCTCCTTGCTGAATTCAACGAGATTAGACCCATAACTGAAGTCATCAACGTACCAGAAGAGGTGCAGCCATTGGAATCTCCAGACCCCTCAATCCCTGATGCAGAGCAATCACTTGAAAGAGAGCTTTCATTCATACGAAAGGCTAAAGAATCAGGAGTGGTTTACCTTCTTGGCCACGGAGATATTAGAGCAAGAAAGGATTCTTGGTTTATCAAGAAGCTAATGATCAATTACTTCTACGCATTTTTAAGAAAGAATAGCAGGAGGGGTATTGCCAACTTGAGTGTTCCCCACACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG 3042 42.64 MAEAELERGETNCGLTSMDSTESRWVFQDEDQSEIDDEDDEDEDENAGRHRMDLESEEEDNVEQKLIRTGPRIDSFDVEALEVPSAQRHEYECDMKLAEHYWLSADSELHVLQDFSVGKKITLAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEVVMISVGCLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDISVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGHQPGATSAPSINNLFISSTLIPRPEDFARFVLDPENLLGTTLESHQLAASIACFEFEHILGKNFIDMLDFSSLLLILLDASLMSKVRIEGFGLCTILDAFVNNRPSFYTPFFSRCFAGQKFQAWRFCNSLILFLITNYQVRRQCLQIFVISLCGQYSECLQLTFVFLVLPCLFLGYLGQAAYLISNQNGAEHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIVHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIMIVMGFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDVMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDARKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDTDSDEIHSSRLLIAPNGSVYSLGMPLLAEFNEIRPITEVINVPEEVQPLESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3339127 3352534 - Maker00002869 Lcy6g0363 634807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0363 1013 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 535 1013 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy6g0363 1013 Pfam K+ potassium transporter integral membrane domain 123 378 IPR053951 -
Lcy6g0363 1013 Pfam K+ potassium transporter integral membrane domain 537 754 IPR053951 -
Lcy6g0363 1013 Pfam K+ potassium transporter C-terminal domain 768 1011 IPR053952 -
Lcy6g0363 1013 MobiDBLite consensus disorder prediction 45 64 - -
Lcy6g0363 1013 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2390 Lcy-Chr10:47494113 Lcy6g0363 Lcy-Chr6:3339127 8.67E-258 dispersed
Lcy6g0363 Lcy-Chr6:3339127 Lcy7g1064 Lcy-Chr7:11363119 1.18E-153 dispersed
Lcy6g0363 Lcy-Chr6:3339127 Lcy11g0921 Lcy-Chr11:27668715 1.76E-180 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0363 - - - 0.0