Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0368 | ATGATTGTTGAACGGGGAAAGAAGGAGGACGTTCGTCATGTAGCACCGGAAAGGGCAGGGGTAATCAATGCCCTGCCAGTGCATGGCCGTGAGCTTGGCCTTTTTGCTATATATGATGGACATCTAGGAGACAGTGTACCAGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGTGTTTTCTGACATCTTACGATTGCTTCAGGAGGAATTCTGGTCGAATCCCCGTGGCTCCATCTTTAAGGCTTATGAGAAGACAGACCAAGCAATACTCTCACACAGTCCTGACTTGGGAAGAGGTGGATCCACTGCTGTCACTGCAATTTTAATAAACGGTCAAAAATTATGGGTGGCTAATGTTGGAGATTCACGGGCAGTCCTTTCGAAAAAAGGGCAGGAAGTACAAATGTCCATTGATCATGAACCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGTTTTGTCTCTAACATGCCAGGTCTGGTAATGCATTGA | 507 | 45.76 | MIVERGKKEDVRHVAPERAGVINALPVHGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKDVFSDILRLLQEEFWSNPRGSIFKAYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKKGQEVQMSIDHEPNTERGSIEDRGGFVSNMPGLVMH | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3404120 | 3405833 | + | Maker00002745 | Lcy6g0368 | 634812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0368 | 168 | SUPERFAMILY | PP2C-like | 18 | 161 | IPR036457 | - | |
Lcy6g0368 | 168 | Gene3D | - | 1 | 168 | IPR036457 | - | |
Lcy6g0368 | 168 | Pfam | Protein phosphatase 2C | 32 | 161 | IPR001932 | - | |
Lcy6g0368 | 168 | CDD | PP2Cc | 33 | 161 | IPR001932 | - | |
Lcy6g0368 | 168 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 168 | IPR001932 | - | |
Lcy6g0368 | 168 | SMART | PP2C_4 | 2 | 166 | IPR001932 | - | |
Lcy6g0368 | 168 | PANTHER | PROTEIN PHOSPHATASE | 5 | 161 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g0368 | Lcy-Chr6:3404120 | Lcy9g1733 | Lcy-Chr9:42519459 | 1.90E-70 | dispersed | |
Lcy9g2338 | Lcy-Chr9:47748218 | Lcy6g0368 | Lcy-Chr6:3404120 | 4.55E-06 | dispersed | |
Lcy6g0368 | Lcy-Chr6:3404120 | Lcy4g0673 | Lcy-Chr4:8138087 | 4.04E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy6g0368 | K17506 | - | csv:101214223 | 248.44 |