Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0381 ATGGAAAGTTTTGCCCTCCAATCCGTCTCCACTACCTCTTCCTTTTCCCTCCATTCTCCCATTTCTCGCATTTCTCTCCTCCATCGCTCTAAACCCATTCCCCATTCCCATTCCTTCTCCTCTTCCTCCAATTTATCTCGCTCAATTTCGCTTTTTCAATCAACCCCACCAATCCCCCAAACCCCCCTCTTCGTTTCTCGATCTTCCCTTTTCAATCCGCTCTTCAGTCCCAAATTGCGTCGACCCCATCCAATGCGAAGTGCCTCTCAATCGCCGGATAATCAGCCGTTGCCGCCGAACCCACCTCCCAGACAAGGTGCTAAGCCAATCCCATTTCTGATTTCTATCGCTATTGGCCTTATTGTTCGCTTTGCCATCCCGAAACCGGTGGAGGTTTCGACTCAAGCGTGGCAGTTGCTGGCGATTTTCTTGTCGACGATTGCTGGGCTTGTGTTGAGTCCTTTGCCGGTTGGCGCTTGGGCGTTTCTTGGCCTTACTGTCACTGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCCTTTACCAGTGAGGTGATTTGGTTGATTGTCATTTCGTTCTTTTTTGCTCGTGGGTTTGTGAAAACTGGGTTGGGGGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACGCTTGGTTTGTCTTATGGTTTGACGCTCAGTGAGGCTTTGATTGCCCCTGCTATGCCTAGCACTACTGCCAGGGCTGGAGGTGTGTTTTTGCCCATTATTAAGTCCTTGTCGCTTGCTGCTGATAGTAAACCCAACGACCCTTCGTCTAAAAAGATCGGTGCTTATCTTGTTCAGTCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGCTGCTGCTCAAAACTTGTTGTGCCTTAAATTGGCTGAAGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGGCCAAGTGTGCTTGTGTGCCAGCAGTCATCGGTCTCTTAGCAACTCCAGCAATCTTATACAAACTGTTTCCTCCAGAAACCAAGAACACGCCAGAAGCCCCAGCCATGGCTACAAGAAAATTGGAGGCTATGGGTCCCGTCACAAAGAACGAATGGATCATGGTCGGTACTATGCTTATTGCAGTCTCATTATGGATCGCTGGGGAGGCCCTTAAAATACCTAGTGTTGTAGCTGCAATGATTGGCTTATCAATACTCCTTACTCTGGGTGTCCTAGATTGGGATGACTGCTTAGCCGAAAAGTCGGCCTGGGATACGTTAGCTTGGTTCGCTGTCCTTGTGGGCTTGGCAGGCCAATTGACAAGTCTCGGTCTCGTAGGCTGGATGTCGAATTGTGTGGCCCATTTGCTGAAGTCTCTCTCTCTCAGCTGGCCTGCAGCATTTGCTATTCTTCAGGTGTCTTACTTCTTCGTTCACTACCTCTTCGCTAGCCAAACCGGTCACGTTGGAGCTTTATACTCGGCATTCCTTGCGATGCACTTGGCTGCCAAGGTGCCTGGTGTGTTGGCCGCACTGGCCTTGGCTTACAACACGAATCTCTTCGGCGCTCTGACTCACTACAGCAGTGGCCAAGCTGCAGTATACTATGGAGCGGGTTACGTCGAGCTACCAGATGTGTTCAAAATCGGTATCGTGATGGCCCTCGTAAACGGTATTATCTGGACCGTGTTTGGATGTATTTGGTGGAAGGTCCTGGGTCTATATTGA 1731 49.16 MESFALQSVSTTSSFSLHSPISRISLLHRSKPIPHSHSFSSSSNLSRSISLFQSTPPIPQTPLFVSRSSLFNPLFSPKLRRPHPMRSASQSPDNQPLPPNPPPRQGAKPIPFLISIAIGLIVRFAIPKPVEVSTQAWQLLAIFLSTIAGLVLSPLPVGAWAFLGLTVTVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTLSEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLVQSQFQCAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKCACVPAVIGLLATPAILYKLFPPETKNTPEAPAMATRKLEAMGPVTKNEWIMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLDWDDCLAEKSAWDTLAWFAVLVGLAGQLTSLGLVGWMSNCVAHLLKSLSLSWPAAFAILQVSYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKIGIVMALVNGIIWTVFGCIWWKVLGLY 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3577684 3581823 - Maker00002694 Lcy6g0381 634825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0381 576 NCBIfam DASS family sodium-coupled anion symporter 128 570 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy6g0381 576 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 8 576 IPR030676 GO:0005215(PANTHER)
Lcy6g0381 576 MobiDBLite consensus disorder prediction 81 103 - -
Lcy6g0381 576 Pfam Sodium:sulfate symporter transmembrane region 112 575 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0381 Lcy-Chr6:3577684 Lcy8g2095 Lcy-Chr8:47132526 4.15E-143 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0381 - - - 0.0