Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0441 | ATGTCTCTCTCTCCTGACCATTCCGCTGCTTCCTCCTCCTCCTCCTCCGGTGCCGGTCGCCACCTCGCCGCCCACTTTCTCACTTCCACCACGGCGGACTACCCGATCTACGATGACTCCGCCATTTTCAGGCTTCTCCAATCGGAGCTCGACCACATGCCCCGCCGTGACTACGTTCGCCGGTGCCGTGACCGCTCGATCGACGTCACCGCCCGCCAGGACTCGATTAACTGGATCTTGAAGGTGCACGCGCATTACAATTTCAAACCGGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCTCCAATTTCCTTCCGCGGCCGAATGGATGGCCGTTTCAGCTTCTATCGGTGGCGTGTTTGTCGTTAGCGGCGAAAATGGAGGAGCCTCATGTCCCACTGCTTTTGGACCTCCAAATCTTCGAGCCTAAGTACGTTTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCATCACTTCATCTCCGATCTTCCTTCTTCTTCCGCCGCAGACGACGGCGGCGATGGCGACGGTGACGACTGTCATCGCCTCTTCTCAACTTCCTCTGATCTCATTCTCAGCACCACACGCGTGATCGATTTCTTGGGGTTTCCGCCGTCCGCCATTGCTGCCGCCGCCGTTCTTTGCGCCGCTGGTGAGAGGTTCGATTCCCCGGCGGTGTGTAGCCATTTTCTTGCGGCGAACAGAGTCGTAAGTGTTAATTCAATGTTTCTGTGTGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATCGACACGTGTCCGGCCGGCCTCCGAAAACTGCGGAGCGGAGGAGCCGAGCAGCCGGCGCCGCCGAGTCCAGTCGGCGTACTCGACGCGGCTGCATGCGGTAGCTGTGACACGCGCTTGGACAATCCCGGCTCCACCAGCCACGAAGCCGCCGCCGTCGAGCCACCGACTAAACGGCTGCGATCCTCTGCGCCGGATGTACAGGAGCAGTAG | 1062 | 57.82 | MSLSPDHSAASSSSSSGAGRHLAAHFLTSTTADYPIYDDSAIFRLLQSELDHMPRRDYVRRCRDRSIDVTARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRPNGWPFQLLSVACLSLAAKMEEPHVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSAADDGGDGDGDDCHRLFSTSSDLILSTTRVIDFLGFPPSAIAAAAVLCAAGERFDSPAVCSHFLAANRVVSVNSMFLCEMVRSCHQLMEEYVIDTCPAGLRKLRSGGAEQPAPPSPVGVLDAAACGSCDTRLDNPGSTSHEAAAVEPPTKRLRSSAPDVQEQ | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4117844 | 4120889 | - | Maker00002401 | Lcy6g0441 | 634885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0441 | 353 | SUPERFAMILY | Cyclin-like | 33 | 171 | IPR036915 | - | |
Lcy6g0441 | 353 | ProSitePatterns | Cyclins signature. | 72 | 103 | IPR048258 | - | |
Lcy6g0441 | 353 | Pfam | Cyclin, C-terminal domain | 174 | 249 | IPR004367 | - | |
Lcy6g0441 | 353 | Pfam | Cyclin, N-terminal domain | 45 | 172 | IPR006671 | - | |
Lcy6g0441 | 353 | CDD | CYCLIN_AtCycD-like_rpt1 | 71 | 169 | - | - | |
Lcy6g0441 | 353 | PANTHER | CYCLINS | 37 | 279 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Lcy6g0441 | 353 | FunFam | D2/4-type cyclin | 55 | 172 | - | - | |
Lcy6g0441 | 353 | SUPERFAMILY | Cyclin-like | 156 | 283 | IPR036915 | - | |
Lcy6g0441 | 353 | SMART | Cyclin_C_2 | 174 | 339 | IPR004367 | - | |
Lcy6g0441 | 353 | Gene3D | - | 44 | 269 | - | - | |
Lcy6g0441 | 353 | Gene3D | - | 55 | 172 | - | - | |
Lcy6g0441 | 353 | SMART | cyclin_7 | 77 | 165 | IPR013763 | - | |
Lcy6g0441 | 353 | MobiDBLite | consensus disorder prediction | 322 | 353 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g1500 | Lcy-Chr13:33656000 | Lcy6g0441 | Lcy-Chr6:4117844 | 5.68E-53 | dispersed | |
Lcy6g0441 | Lcy-Chr6:4117844 | Lcy7g0207 | Lcy-Chr7:1819009 | 4.77E-63 | dispersed | |
Lcy6g0441 | Lcy-Chr6:4117844 | Lcy1g0824 | Lcy-Chr1:7022381 | 4.82E-61 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy6g0441 | K18810 | - | csv:101219121 | 503.056 |