Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0503 ATGGCTTCCATCTCTGTTGGGATTCACTTGCCCCCATCGCATCATTGGAAGAGATTTTCACTTCATTCCCAATCTCCCATTTCACTCCCATTTCACACTAGCTATGGTTCTTCTTTGAGTAGAGTCAGGACTCCAAGGTTGCTTGGTAAGAACCTTCTCGTGCGGGCTGAAGACGAGGCTAAAGGCTCTTCACCAGCGTCGTCTTCTTCGTTTCAGCAACAGGAAGCTTCAACCAACTTCAGTAAACAACTGGAGGTTTCCCTTGTTGAAACTTTTGCTCAATGTTTTACATTATTGGTTGAAATTGACTTTGATCGTTTTGTAGTTGACGAAGTAAGTTCACAGGATTTCGAAGATAGTTACCAGCCAAAGACCGATTTAGTAAAGGCTTTTGCAATATTTGCAGCAGCCATTACTGGAACAATGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTTGGGTTATTGATGGCGGTTGCCTTATGGGTTGTTCGGAGTATTGGGGCTCCATCCACTGAAATTGCTGCTTCAGAGTTAACACATGCAACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTTGGGGCGATGACCATAGTGGAGATTATCGACGCTCATCAAGGATTTAAGTTGGTTACAGACAGTATAACCACTCGAAAACCACGAACTCTTCTCTGGGTGATTGGGTTTGTAACCTTTTTTCTAAGTTCAGTCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTTCCTCCATCAGAGTATCGCAAGCTACTTGGAGCTGTAATCGTTATAGCAGCAAATGCTGGTGGTGCATGGACACCTATTGGAGATGTAACCACCACCATGCTATGGATACATGGTCAGATATCAACAGTGCCGACACTCAAAAACTTGATTATACCTTCGGCTGTTTCACTTGCAGTTCCGCTAGCTCTTCTGTCTCTAACAAGTGAAGTTAATGGAAAGGGACAGGAAATGTCTAATGTCATGGCGTCCGAGCAGATGGCTCCTCGAGGAAAGCTTGTCTTCTCTGTAGGTGTTGGAGCTTTGGTCTTTGTTCCAGTGTTCAAGGCTCTCACAGGTTTGCCCCCCTACATGGGTATGCTGCTCGGACTAGGAATTCTTTGGATTCTGACTGATGCAATTCACTATGGTGAATCGGAGAGGCAAAAGTTGAAAGTTCCACAGGCTTTATCTCGTATTGATACACAAGGAGCACTTTTTTTCCTTGGTATCCTTTTGTCTGTCAGCAGGAGGAAATTGGTTCTGTTCCAATGCCTTCATCCTTTGGAACTTGATTCAGAACTTCCCGTTGGCTGCTTGTTTATCAGAGAACTAAGGGCATTATCATATGATATTAAAGCTGACTTAGAGGCTGCGGGAGTCCTACGCGAGTTAGCAAACTACCTTGATGCTCATATTCCAAATATTGAACTCATAGCGAGTGCAGTCGGTGTTGTATCAGCAATTATAGACAATGTGCCACTAGTTGCAGCAACAATGGGAATGTACGATCTCTCCTCCTTCCATCAAGATTCCGAGTTCTGGCAGCTGATTGCATTCTGTGCTGGTACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTAGCATTCATGGGAATGGAGAAGGTGGACTTCTTTTGGTACTTGAGAAAGGTTAGCGGTTTCGCTTTCGCTGGATATGCTGCTGGAATTGCTGCCTATTTAGCTCTTCATAACCTCAACATATCGCTACCTACAACTATTGCTGAGGTGCCTTTCATTTTGGGTTCATAA 1887 43.67 MASISVGIHLPPSHHWKRFSLHSQSPISLPFHTSYGSSLSRVRTPRLLGKNLLVRAEDEAKGSSPASSSSFQQQEASTNFSKQLEVSLVETFAQCFTLLVEIDFDRFVVDEVSSQDFEDSYQPKTDLVKAFAIFAAAITGTMAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVALWVVRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVIGFVTFFLSSVLDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTVPTLKNLIIPSAVSLAVPLALLSLTSEVNGKGQEMSNVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSRRKLVLFQCLHPLELDSELPVGCLFIRELRALSYDIKADLEAAGVLRELANYLDAHIPNIELIASAVGVVSAIIDNVPLVAATMGMYDLSSFHQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISLPTTIAEVPFILGS 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4709908 4718987 - Maker00002779 Lcy6g0503 634947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0503 628 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 107 453 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
Lcy6g0503 628 Pfam Citrate transporter 165 536 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy6g0503 628 NCBIfam sodium:proton antiporter NhaD 182 412 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0503 - - - 0.0