Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0576 ATGGACATCCAAGAAGGAAGGTCACTGGCCGAGACGCCGACCTACTCGGTTGCTTCTGTGGTTACCGTCATGGTCTTCGTCTGCTTTGTGGTGGAGCGGGCAATCTATAGATTTGGAAAGTGGTTGAAGAAGACCAAGAGAAAGGCTCTATTTGCTTCTTTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGATGCTGGCACAATGTGCAAGGTGGATCTCTGAAATTTGTGTGAACTCATCCCTTTTCACCAGCAGATTCTACATTTGTTCAGAAGAAGATTATGCCACCGATGAACATGTTATGCTTGAAGGTTCTTTTTTATCTCCTAATGAAACTGGCATTCCTCCCAGAGGATTTAGTGCTCTACCACATCAATGTGGCGAGGGTCGTGAGCCTTTTGTTTCATATGAGGGACTCGAACAACTTCATCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGTTGTCTGGCAGTTGGTCTGGCAATGAGTAAGATTTACAGTTGGAGGAAATGGGAAAATCAAGTTAAATTAGCTGCTGAAGAAAATTTGCCAGCTAAAAGAAATAAGGTGATGAGGCGGCAAACGACATTTGTATTCCATCACACATCTCATCCATGGAGCAGGAGTCGTATTCTCATTTGGATGCTTTGTTTTCTACGTCAGTTCAAGAGTTCGATAAAGAAATCAGACTATTTGGCCCTCCGTTTGGGATTCATTACGGTGAGTACTCTGTCTGGGATCCATTCCTTTTTCCATCTGCCAGTAGGAGTGCCTGCCAGTATAGACATTTCTGTAGCTTACACAATACCTGCTCCGACATGTGTCATTTTTTCTATTCAGAAGCACAAACTACCAATTTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCATGGAATCCTTGGAATTAGCTGCCCACTATGGGGCTACGCCATTCTTTGCATCTTTGTCAACATTCACGGTTGTCTCTGTTCAACAGGTTTAAATATCTACTTTTGGCTTTCTTTCATACCGGCGGCTGTAAGTATCTGTGTTCAACTTGTCATGCTGGTTGGGACAAAACTTCAACATGTAGTCTCTTCTTTGGCACTTGAAGTTCTGGAACAAACAGGTCCAGCAGCAATTGGGACTCAAATAAAACCAAGAGATGATCTGTTTTGGTTTGGAAAGCCTGAGATATTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCAACATTTATCTGGTCCTTGTGGGGATTTAAGGAGAGATCTTGCTTCATGAAGAACAACTATATGATAATCACAAGGTTGACTTCCGGTGTTCTTGTTCAGTTTTGGTGCAGCTATAGCACAGTGCCACTTAATGTAATTGTTACACAGATGGGATCCAAGTGTAAGAAGGCATTGGTGGCTGAGAGTGTGAGAGAGTCACTGCATAGTTGGTGCAAGAGAGTAAAGGAGAGGTCCAAACGTGACTCTGCACAGTCTGTCACTACAAGATCAATATGTTCACTTGAATCAATGGTTGACGAGCGAGATGAAATAACCGTTGCATCGGGTACATTGTCACGGTGCACGTCTTTCGACACTTTGAATCAGGTGACGATACAATCTTCTACCCAACTGGAGGCCATTATTGAGTCTTCAAGCTTACCGAAGCATGAACTTCCCCCCACTATGGCAAATTATCTATCACAATCTGCAAGTGTTTCTGCTGCTCCTGCTAACAGCCAAGAAAACAATGCAGAAAGTGGAGAAGATAGCAGAGTCGAGTCTCTTTTCGACTTGTTCCAAAGGACATGA 1842 42.89 MDIQEGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLMLAQCARWISEICVNSSLFTSRFYICSEEDYATDEHVMLEGSFLSPNETGIPPRGFSALPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVKLAAEENLPAKRNKVMRRQTTFVFHHTSHPWSRSRILIWMLCFLRQFKSSIKKSDYLALRLGFITVSTLSGIHSFFHLPVGVPASIDISVAYTIPAPTCVIFSIQKHKLPISYDFHKYMVRSMEDEFHGILGISCPLWGYAILCIFVNIHGCLCSTGLNIYFWLSFIPAAVSICVQLVMLVGTKLQHVVSSLALEVLEQTGPAAIGTQIKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNNYMIITRLTSGVLVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRESLHSWCKRVKERSKRDSAQSVTTRSICSLESMVDERDEITVASGTLSRCTSFDTLNQVTIQSSTQLEAIIESSSLPKHELPPTMANYLSQSASVSAAPANSQENNAESGEDSRVESLFDLFQRT 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5470583 5476485 - Maker00002891 Lcy6g0576 635020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0576 613 MobiDBLite consensus disorder prediction 575 596 - -
Lcy6g0576 613 MobiDBLite consensus disorder prediction 575 613 - -
Lcy6g0576 613 Pfam Mlo family 6 256 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy6g0576 613 Pfam Mlo family 288 516 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy6g0576 613 PANTHER MLO-LIKE PROTEIN 1 3 550 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0576 Lcy-Chr6:5470583 Lcy9g1288 Lcy-Chr9:37572574 1.32E-89 dispersed
Lcy6g0576 Lcy-Chr6:5470583 Lcy11g0297 Lcy-Chr11:4760616 2.32E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0576 K08472 - csv:101204236 948.347