Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0627 ATGTACATTGATGCAGCCATGCTTCTTCTCTCTATTCCTTTTCTTGCATTCTACTTAACCTTCTATTTCTACTCCCTCTCGCCTCCGATGCTGGACGCTATCTGTTTCTTGTCCTCTGCATTCTGGTTGAATACGGATGAGTCCAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACATGTTACAAGCAATGGGGAACAGTTATTGTGGTACATGTAGAGACAGGAAAATCCAATGGTTCCTTAAATGTAAAGAGTGAAGATCTAGCTGCGACTCGAATTCAAAATGCATTTCGAGCATTTGCGGCCAGAAAGATTGTACATAATTCGAAAGGGCCAGAGAGATGCCAGGATCTAATTCAAGGTGAAATGGCTACAAAACAGGTGTTGAGCTTCATTCATTCATGGAGCAAAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCAGAAGCTTGAGGCTAAGATTCATGAACTTGAGGTAGAATGGTGCGGTGGGTCTGAAACAAAAGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTTAAACGGGAGCGAGCCATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAACTCCATCTTGGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAAAACTGGGGATGGAGTTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATCCCAAAGAAGGTGCAGACGAAGCAAACAAGCAAACTCAATAAAGTCACGACACATCAACCGTCATTGAAGGTCTCGAACTCAGCCAGACTTTCTTCGTCAAACAGTAAGGGGAGTTCAAAGGCCAGAAACTCTGCTATACCCAACTGCTGA 933 43.94 MYIDAAMLLLSIPFLAFYLTFYFYSLSPPMLDAICFLSSAFWLNTDESSKLFLDNIQATEGETCYKQWGTVIVVHVETGKSNGSLNVKSEDLAATRIQNAFRAFAARKIVHNSKGPERCQDLIQGEMATKQVLSFIHSWSKMQQEIRARRLCMVTEYRVKQKKLENQQKLEAKIHELEVEWCGGSETKEEILFKIQQREEAAVKRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVTTHQPSLKVSNSARLSSSNSKGSSKARNSAIPNC 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5971289 5980594 + Maker00004207 Lcy6g0627 635071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0627 310 ProSiteProfiles IQ motif profile. 90 118 - -
Lcy6g0627 310 MobiDBLite consensus disorder prediction 260 310 - -
Lcy6g0627 310 Coils Coil 160 180 - -
Lcy6g0627 310 MobiDBLite consensus disorder prediction 258 310 - -
Lcy6g0627 310 PANTHER IQ-DOMAIN 5-RELATED 81 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0627 Lcy-Chr6:5971289 Lcy7g0669 Lcy-Chr7:6192034 1.84E-28 dispersed
Lcy6g0627 Lcy-Chr6:5971289 Lcy1g0290 Lcy-Chr1:2611003 4.23E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0627 - - - 0.0