Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0666 | TCCACTTTCGAGGGCTTTGAAGCTTCTTCTGGGTTTCTGCTTGTTGTTTTGTTTTGTGGGAATCTGAGGGTTTTCGATCTGGGGAGCGAGGAGGAGGAAGAAGAAGATGCCGCAAGATCATCCAAAGAAGGGGTCAGGGATTTAGAGAGGAAAAGGGAAGTGTACTTGGATTTGGAGGCCAAAGAAATCAACTTTTTTACTGAATATGGGGATGCTAATAGATATGAGATTCTTGAAGTTATTGGAAAGGGAAGTTACGGAGTTGTTTGTTCAGCTATTGACTTGCAAACCAGGGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTGATCACGTATCTGATGCTATTCGAATCCTTCGTGAAGTGAAGTTGCTTAGATTGTTACGGCATCCTGATATTGTTGACATCAAGCATATTATGCTCCCACCTTCTAAAAAGGAATTTAAAGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACTCGTGAACATCATCAGTTCTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATTCAGCAAATGTGTATCATAGAGATCTGAAGCCAAAGAATATATTGGCAAATGCCAATTGCAAGCTTAAAATTTGTGATTTTGGACTTGCAAGAGTTGCTTTCAGTGATGCCCCAACTACAATATTTTGGACAGACTATGTTGCTACTAGATGGTACAGAGCTCCGGAGCTGTGTGGATCATTCTGTTCCAAGGTAGGCAGTAAACTAATTCACATTGAACACTACCTCTATCAAGGCACAACATCTTCGGGTGATTTACTGGCCATGGCTCAGTTGGAATTACTTTCATTTTCATCATGTATAAAATATATTTGGAGCATTGGCTGCATATTTGCTGAGGTCTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGCGTTGCCCATCAATTGGACTTGATTACCGATCTTCTAGGGACTCCCTCATTAGAGACCATTGCAGGAGTTCGGAATGAGAAGGCCAGGAAATACTTGACAGAAATGAGAAAGAAATCTCCAGTGCCGTTTTCACAAAGGTTTCCCAATGCGGATCCTACAGCCATCTGCTTATTGCAAAGGCTATTAGCATTTGATCCGAAGGATCGACCATCGGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCCAAAGTTGAAAGAGAGCCTTCTTGTCAGCCAATCTCAAGATCGGAATTCGAGTTCGAGAGACGGAAATTAACGAAGGATGATTCTCCTATCAATGTCAGCGTTACAGGTCATTTTAAAAGCCAATTCACTTACCACAAGGAGAATAGTGGTAAAAGTGCACCGGTTTTGCCTCTAGAACGGAAACACTTCTCCTTGCCACGGTCTACTGTTTGCACAAATTTGGTTTCACCCGATCGTGAGCCAGTTCGGCGAAATCCCAAAGTCTCTAATAATAGTGTGGTATTACCTGATAGAAAATTTGGGAATCCATCAAAGGCTCATCCTCCACCTAAAGTGCCTACTGGTATGAACATATTTCTCTCCTGTTTTCCCCCTCTAAAGTTTCTCTTTTTTCAATGGACAAGTTCTGTTAGGGTATTTGACTTGTATCTTTTGAGAATCTGTTAG | 1656 | 41.24 | STFEGFEASSGFLLVVLFCGNLRVFDLGSEEEEEEDAARSSKEGVRDLERKREVYLDLEAKEINFFTEYGDANRYEILEVIGKGSYGVVCSAIDLQTREKVAIKRIHDIFDHVSDAIRILREVKLLRLLRHPDIVDIKHIMLPPSKKEFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHSANVYHRDLKPKNILANANCKLKICDFGLARVAFSDAPTTIFWTDYVATRWYRAPELCGSFCSKVGSKLIHIEHYLYQGTTSSGDLLAMAQLELLSFSSCIKYIWSIGCIFAEVLMGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKARKYLTEMRKKSPVPFSQRFPNADPTAICLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRSEFEFERRKLTKDDSPINVSVTGHFKSQFTYHKENSGKSAPVLPLERKHFSLPRSTVCTNLVSPDREPVRRNPKVSNNSVVLPDRKFGNPSKAHPPPKVPTGMNIFLSCFPPLKFLFFQWTSSVRVFDLYLLRIC | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6343868 | 6347779 | + | Maker00004194 | Lcy6g0666 | 635110 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0666 | 551 | SMART | serkin_6 | 75 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy6g0666 | 551 | ProSiteProfiles | Protein kinase domain profile. | 75 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy6g0666 | 551 | Pfam | Protein kinase domain | 297 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy6g0666 | 551 | Pfam | Protein kinase domain | 75 | 251 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy6g0666 | 551 | MobiDBLite | consensus disorder prediction | 479 | 512 | - | - | |
Lcy6g0666 | 551 | SUPERFAMILY | Protein kinase-like (PK-like) | 72 | 423 | IPR011009 | - | |
Lcy6g0666 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 429 | - | - | |
Lcy6g0666 | 551 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 72 | 430 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Lcy6g0666 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 426 | - | - | |
Lcy6g0666 | 551 | FunFam | Mitogen-activated protein kinase | 64 | 169 | - | - | |
Lcy6g0666 | 551 | CDD | STKc_TDY_MAPK | 74 | 430 | - | - | |
Lcy6g0666 | 551 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 104 | IPR017441 | GO:0005524(InterPro) | |
Lcy6g0666 | 551 | FunFam | Mitogen-activated protein kinase | 159 | 270 | - | - | |
Lcy6g0666 | 551 | ProSitePatterns | MAP kinase signature. | 110 | 213 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g0666 | Lcy-Chr6:6343868 | Lcy8g1622 | Lcy-Chr8:42791873 | 5.17E-211 | dispersed | |
Lcy1g0261 | Lcy-Chr1:2355658 | Lcy6g0666 | Lcy-Chr6:6343868 | 1.74E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66019 | None | None | None | None | Lcy | PK |
Pathway information
