Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0683 | ATGGTAGTTGCCTCCCAATGGAAAGCCAAGATCCTACGGCAGCTTCGTCAGGAAACTGCTGCAAGGGCTGAAAGTTATATACAGGTAACTCCTGATGAAGCTCAACTACTTGCGATGCTTGTTCAGATTCTTGGGGCAGAACGGTGCATTGAAGTTGGTGTTTACACAATCTCCTTTACCAAGGAGTTTGCTCTTAGAGTCAAATTACGGATTCTATCTGTCCAAATCTCCTTTACTAAGGAGTTCGCTCTTAGACACTCGAGGATTTTAACGAAACAGCTACATCAGGGGTATGGCTCTGATACCACCTATTATGACAATGGACACTCCACATATCTCCACAATGGTATGATATTGGCCACTTTGGGCATAAGCCTTCATGGCTTTGCTTTTGGTTCCACCCAAAAGGGTTATTCATCCTTGGCTGTTGCACTTGCCCTCCCAGAATCAGGACGTTTAGTTGCCTGTGAATATGATGCCGAAGTTCTTGAGATTGCAAGAATATATTATGAACGTGCTGGTGTTTCACACAAAGTGGATGTGAGACATGGACCTGCAGAAGAAACGCTAGAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGATTATGCTTTTCTTGATGCTGACAAGAATTTGTACGAGGAATTCTTTGAACTGTTGCTACAACTGGTGAGAGTTGGAGGAGTGATTGTCATTGACAATGTCCTTTGGAGTGGAAAGGTTGCTGACCCAATGGTAAATGATGAGTGGACCATTAGCATCCGAAAATTCAACGAAAAGCTAATGAAAGACGATCGAGTCAATATCAGTATGGTACCAATTGGAGATGGTGTGACAATTTGTCGAAAGAAATGA | 858 | 42.77 | MVVASQWKAKILRQLRQETAARAESYIQVTPDEAQLLAMLVQILGAERCIEVGVYTISFTKEFALRVKLRILSVQISFTKEFALRHSRILTKQLHQGYGSDTTYYDNGHSTYLHNGMILATLGISLHGFAFGSTQKGYSSLAVALALPESGRLVACEYDAEVLEIARIYYERAGVSHKVDVRHGPAEETLESLIANGEACSYDYAFLDADKNLYEEFFELLLQLVRVGGVIVIDNVLWSGKVADPMVNDEWTISIRKFNEKLMKDDRVNISMVPIGDGVTICRKK | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6636380 | 6643844 | + | Maker00004203 | Lcy6g0683 | 635127 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0683 | 285 | Pfam | O-methyltransferase | 7 | 56 | IPR002935 | GO:0008171(InterPro) | |
Lcy6g0683 | 285 | Pfam | O-methyltransferase | 135 | 285 | IPR002935 | GO:0008171(InterPro) | |
Lcy6g0683 | 285 | Gene3D | Vaccinia Virus protein VP39 | 133 | 285 | IPR029063 | - | |
Lcy6g0683 | 285 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 66 | 285 | IPR002935 | GO:0008171(InterPro) | |
Lcy6g0683 | 285 | CDD | AdoMet_MTases | 141 | 233 | - | - | |
Lcy6g0683 | 285 | Gene3D | Vaccinia Virus protein VP39 | 3 | 90 | IPR029063 | - | |
Lcy6g0683 | 285 | PANTHER | O-METHYLTRANSFERASE-RELATED | 9 | 56 | IPR050362 | GO:0008757(PANTHER) | |
Lcy6g0683 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 137 | 285 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g0683 | Lcy-Chr6:6636380 | Lcy9g1066 | Lcy-Chr9:34474792 | 2.00E-33 | dispersed | |
Lcy6g0683 | Lcy-Chr6:6636380 | Lcy6g0684 | Lcy-Chr6:6645411 | 4.59E-73 | tandem |
Pathway information
