Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0687 ATGGCGGACGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTCGGGATGCGAGCTAGAATAGCCCTGGCCGAGAAGGGCGTGGCCTACGAGTATGTGGAAGAAGATCTGAGGAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAGTTAAAAAGCAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCTCTGCTGCCGTCTGATCCTTACCAGAGGGCTCAGGCCAGGTTCTGGGTGGATTTCATCGACAAAAAGCTTTATGATCCTACGAGGAAGATATGGGGCAGCAAAGGAGAGGAGCAGGAGGCAGGCAAGAAGGAAGTGATAGGAATATTGAAGCAATTGGAAGAGTTTCTTGGGGAGAAGGCTTTCTTTGGAGGTGATTGTTTGGGATTTGTAGACATTGCTTTGATTGGATTCTACCCTTGGTTTTATACATATGAAACCATTGGGAACTTTAGTTTTGAGGCTGAGTGTCCCAAGACAGTGGCTTGGGCCAAGAGATGCTTGCAAAAGGACAGTGTTTCAAAGACCCTGCCTGACTCCAAGAAGGTCTATGACTTTGTGCTTCAAATGAAGAAACATCTTGGCCTTGACTAA 660 46.36 MADEVKLLDFWPSMFGMRARIALAEKGVAYEYVEEDLRNKSPLLLQMNPVKKQIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKLYDPTRKIWGSKGEEQEAGKKEVIGILKQLEEFLGEKAFFGGDCLGFVDIALIGFYPWFYTYETIGNFSFEAECPKTVAWAKRCLQKDSVSKTLPDSKKVYDFVLQMKKHLGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6678324 6680468 + Maker00004166 Lcy6g0687 635131

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0687 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Lcy6g0687 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Lcy6g0687 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lcy6g0687 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lcy6g0687 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lcy6g0687 219 Gene3D - 88 219 - -
Lcy6g0687 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Lcy6g0687 219 FunFam Tau class glutathione S-transferase 1 87 - -
Lcy6g0687 219 Gene3D Glutaredoxin 1 87 - -
Lcy6g0687 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Lcy6g0687 219 Pfam Glutathione S-transferase, C-terminal domain 117 191 IPR004046 -
Lcy6g0687 219 SFLD Main (cytGST) 2 216 - -
Lcy6g0687 219 FunFam Glutathione S-transferase U20 88 219 - -
Lcy6g0687 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lcy6g0687 219 CDD GST_N_Tau 5 78 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0687 K00799 - - csv:101218562 374.785
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0687 Lcy-Chr6:6678324 Lcy6g0691 Lcy-Chr6:6703209 3.55E-144 dispersed
Lcy6g0687 Lcy-Chr6:6678324 Lcy6g0688 Lcy-Chr6:6681094 2.28E-138 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lcy3g1722 . 28 233 Glutathione S-transferase Gene Family AT4G02520 60.3 3.5e-66 248.8
Lcy3g1714 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 8.6e-65 244.2
Lcy3g1717 . 5 211 Glutathione S-transferase Gene Family AT4G02520 58.6 2.3e-62 236.1
Lcy3g1715 . 5 210 Glutathione S-transferase Gene Family AT4G02520 56.9 2.9e-60 229.2
Lcy3g1716 . 58 263 Glutathione S-transferase Gene Family AT4G02520 53.6 6.0e-58 221.5
Lcy3g1718 . 4 146 Glutathione S-transferase Gene Family AT4G02520 55.5 3.1e-38 156.0
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT2G02930 61.0 1.2e-66 250.4
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT2G02930 58.7 1.3e-65 246.9
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT2G02930 58.8 1.8e-62 236.5
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT2G02930 57.6 5.8e-61 231.5
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT2G02930 53.8 1.7e-57 219.9
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT2G02930 55.8 4.0e-38 155.6
Lcy3g1722 . 26 230 Glutathione S-transferase Gene Family AT1G02950 56.3 5.3e-61 231.9
Lcy3g1714 . 5 206 Glutathione S-transferase Gene Family AT1G02950 52.7 2.2e-59 226.5
Lcy3g1715 . 6 207 Glutathione S-transferase Gene Family AT1G02950 54.2 9.4e-58 221.1
Lcy3g1717 . 6 207 Glutathione S-transferase Gene Family AT1G02950 56.2 1.6e-57 220.3
Lcy3g1716 . 59 260 Glutathione S-transferase Gene Family AT1G02950 51.2 3.3e-55 212.6
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT1G02930 61.4 4.1e-67 251.9
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT1G02930 56.7 1.1e-64 243.8
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT1G02930 58.2 9.3e-64 240.7
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT1G02930 56.5 1.5e-61 233.4
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT1G02930 54.6 6.3e-60 228.0
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT1G02930 56.9 1.9e-40 163.3
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT1G02920 62.8 1.3e-68 256.9
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT1G02920 59.6 7.7e-66 247.7
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.7 2.9e-65 245.7
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT1G02920 58.0 3.6e-63 238.8
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT1G02920 56.0 5.2e-62 235.0
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT1G02920 58.3 2.7e-42 169.5
Lcy3g1714 . 1 215 Glutathione S-transferase Gene Family AT2G47730 58.8 2.1e-68 256.5
Lcy3g1715 . 1 215 Glutathione S-transferase Gene Family AT2G47730 60.2 1.1e-66 250.8
Lcy3g1722 . 27 237 Glutathione S-transferase Gene Family AT2G47730 58.0 1.6e-65 246.9
Lcy3g1716 . 53 267 Glutathione S-transferase Gene Family AT2G47730 56.9 1.5e-63 240.4
Lcy3g1717 . 5 215 Glutathione S-transferase Gene Family AT2G47730 58.0 5.0e-62 235.3
Lcy3g1718 . 4 150 Glutathione S-transferase Gene Family AT2G47730 54.7 6.5e-38 155.2
Lcy3g1712 . 3 150 Glutathione S-transferase Gene Family AT3G62760 56.1 8.4e-47 184.5
Lcy1g1517 . 3 213 Glutathione S-transferase Gene Family AT3G09270 52.8 5.9e-64 241.5
Lcy1g1516 . 3 213 Glutathione S-transferase Gene Family AT3G09270 54.5 1.7e-63 240.0
Lcy1g1496 . 3 228 Glutathione S-transferase Gene Family AT3G09270 50.4 2.7e-61 232.6
Lcy1g1498 . 33 244 Glutathione S-transferase Gene Family AT3G09270 55.1 1.4e-60 230.3
Lcy1g1495 . 3 208 Glutathione S-transferase Gene Family AT3G09270 53.4 2.3e-60 229.6
Lcy7g0233 . 4 218 Glutathione S-transferase Gene Family AT1G69930 53.7 8.3e-61 231.1
Lcy7g0233 . 6 217 Glutathione S-transferase Gene Family AT1G69920 51.2 3.7e-54 209.1
Lcy7g0233 . 1 217 Glutathione S-transferase Gene Family AT1G27130 52.0 3.1e-60 229.2
Lcy7g0233 . 1 217 Glutathione S-transferase Gene Family AT1G27140 50.5 4.6e-54 208.8
Lcy7g0233 . 4 224 Glutathione S-transferase Gene Family AT1G59670 50.9 7.8e-59 224.6
Lcy7g0233 . 4 222 Glutathione S-transferase Gene Family AT1G59700 55.0 9.5e-65 244.2
Lcy7g0233 . 1 222 Glutathione S-transferase Gene Family AT1G10370 65.2 1.5e-78 290.0
Lcy7g0233 . 1 222 Glutathione S-transferase Gene Family AT1G10360 62.5 2.6e-75 279.3
Lcy6g0687 . 1 214 Glutathione S-transferase Gene Family AT1G78380 70.1 4.8e-87 318.2
Lcy6g0691 . 1 215 Glutathione S-transferase Gene Family AT1G78380 69.8 1.1e-86 317.0
Lcy6g0692 . 89 304 Glutathione S-transferase Gene Family AT1G78380 66.2 9.5e-83 303.9
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78380 67.9 2.8e-82 302.4
Lcy6g0688 . 1 215 Glutathione S-transferase Gene Family AT1G78380 67.0 5.2e-81 298.1
Lcy6g0687 . 1 215 Glutathione S-transferase Gene Family AT1G78370 63.7 7.4e-80 294.3
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78370 62.6 1.2e-77 287.0
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78370 63.7 5.9e-77 284.6
Lcy6g0688 . 1 216 Glutathione S-transferase Gene Family AT1G78370 61.6 3.9e-73 271.9
Lcy6g0692 . 89 302 Glutathione S-transferase Gene Family AT1G78370 58.4 6.3e-71 264.6
Lcy6g0687 . 1 214 Glutathione S-transferase Gene Family AT1G78340 66.8 1.6e-82 303.1
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78340 64.0 1.8e-78 289.7
Lcy6g0688 . 1 215 Glutathione S-transferase Gene Family AT1G78340 63.7 5.9e-77 284.6
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78340 63.3 2.2e-76 282.7
Lcy6g0692 . 89 304 Glutathione S-transferase Gene Family AT1G78340 61.6 4.2e-75 278.5
Lcy6g0687 . 1 220 Glutathione S-transferase Gene Family AT1G78320 53.4 7.6e-60 227.6
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78320 51.9 5.4e-58 221.5
Lcy6g0692 . 89 302 Glutathione S-transferase Gene Family AT1G78320 50.5 3.5e-57 218.8
Lcy6g0689 . 1 221 Glutathione S-transferase Gene Family AT1G78320 52.7 3.5e-57 218.8
Lcy6g0688 . 1 221 Glutathione S-transferase Gene Family AT1G78320 52.7 1.5e-55 213.4
Lcy6g0687 . 1 219 Glutathione S-transferase Gene Family AT1G17180 67.1 4.4e-88 321.6
Lcy6g0691 . 1 219 Glutathione S-transferase Gene Family AT1G17180 67.1 3.7e-87 318.5
Lcy6g0689 . 1 220 Glutathione S-transferase Gene Family AT1G17180 65.0 1.1e-83 307.0
Lcy6g0688 . 1 220 Glutathione S-transferase Gene Family AT1G17180 65.0 1.5e-83 306.6
Lcy6g0692 . 89 307 Glutathione S-transferase Gene Family AT1G17180 62.1 8.9e-81 297.4
Lcy6g0687 . 3 217 Glutathione S-transferase Gene Family AT1G17190 56.3 3.1e-73 272.3
Lcy6g0691 . 3 217 Glutathione S-transferase Gene Family AT1G17190 56.7 2.0e-72 269.6
Lcy6g0689 . 3 218 Glutathione S-transferase Gene Family AT1G17190 56.9 7.5e-72 267.7
Lcy6g0688 . 3 218 Glutathione S-transferase Gene Family AT1G17190 57.4 1.7e-71 266.5
Lcy6g0692 . 91 305 Glutathione S-transferase Gene Family AT1G17190 54.4 6.0e-69 258.1
Lcy6g0687 . 3 214 Glutathione S-transferase Gene Family AT3G43800 56.5 4.7e-69 258.5
Lcy6g0689 . 3 215 Glutathione S-transferase Gene Family AT3G43800 56.2 1.5e-67 253.4
Lcy6g0692 . 91 302 Glutathione S-transferase Gene Family AT3G43800 55.6 1.7e-66 250.0
Lcy6g0691 . 3 214 Glutathione S-transferase Gene Family AT3G43800 54.2 2.9e-66 249.2
Lcy6g0688 . 3 215 Glutathione S-transferase Gene Family AT3G43800 54.8 4.1e-65 245.4
Lcy6g0687 . 4 220 Glutathione S-transferase Gene Family AT1G53680 57.5 2.3e-68 256.1
Lcy6g0691 . 4 220 Glutathione S-transferase Gene Family AT1G53680 56.6 2.0e-67 253.1
Lcy6g0689 . 4 221 Glutathione S-transferase Gene Family AT1G53680 54.3 1.7e-66 250.0
Lcy6g0688 . 4 221 Glutathione S-transferase Gene Family AT1G53680 54.3 3.7e-66 248.8
Lcy6g0692 . 92 308 Glutathione S-transferase Gene Family AT1G53680 52.5 1.2e-61 233.8
Lcy8g0114 . 52 225 Glutathione S-transferase Gene Family AT2G02390 64.9 6.4e-59 224.6
Lcy8g0117 . 55 272 Glutathione S-transferase Gene Family AT2G02390 52.8 1.3e-56 216.9
Lcy8g0114 . 11 223 Glutathione S-transferase Gene Family AT2G02380 61.0 7.6e-72 267.7
Lcy8g0117 . 14 271 Glutathione S-transferase Gene Family AT2G02380 52.7 1.9e-70 263.1
Lcy8g0116 . 67 204 Glutathione S-transferase Gene Family AT2G02380 63.8 3.5e-48 189.1
Lcy5g0247 . 12 228 Glutathione S-transferase Gene Family AT5G02780 67.1 1.5e-81 300.1
Lcy5g0248 . 13 235 Glutathione S-transferase Gene Family AT5G02780 66.7 4.8e-80 295.0
Lcy5g0249 . 52 316 Glutathione S-transferase Gene Family AT5G02780 54.7 2.5e-73 272.7
Lcy5g0245 . 73 196 Glutathione S-transferase Gene Family AT5G02780 63.2 4.5e-38 155.6
Lcy5g0247 . 1 232 Glutathione S-transferase Gene Family AT3G55040 58.4 1.2e-77 287.3
Lcy5g0248 . 3 233 Glutathione S-transferase Gene Family AT3G55040 57.3 8.7e-76 281.2
Lcy5g0249 . 104 314 Glutathione S-transferase Gene Family AT3G55040 55.7 4.1e-65 245.7
Lcy7g0799 . 105 354 Glutathione S-transferase Gene Family AT3G55040 50.4 7.7e-64 241.5
Lcy5g0247 . 6 231 Glutathione S-transferase Gene Family AT5G02790 69.2 1.0e-90 330.5
Lcy5g0248 . 7 235 Glutathione S-transferase Gene Family AT5G02790 67.8 1.0e-87 320.5
Lcy5g0249 . 56 316 Glutathione S-transferase Gene Family AT5G02790 55.3 3.7e-77 285.4
Lcy5g0245 . 73 196 Glutathione S-transferase Gene Family AT5G02790 65.3 2.5e-41 166.4
Lcy7g0839 . 1 212 Glutathione S-transferase Gene Family AT1G19570 68.5 7.5e-85 310.8
Lcy7g0840 . 1 210 Glutathione S-transferase Gene Family AT1G19570 66.8 3.0e-81 298.9
Lcy12g0185 . 64 270 Glutathione S-transferase Gene Family AT1G19570 60.6 7.8e-74 274.2
Lcy12g1111 . 61 206 Glutathione S-transferase Gene Family AT1G19570 56.9 1.2e-42 170.6
Lcy7g0839 . 1 211 Glutathione S-transferase Gene Family AT1G75270 73.1 7.8e-90 327.4
Lcy7g0840 . 1 210 Glutathione S-transferase Gene Family AT1G75270 70.1 2.3e-86 315.8
Lcy12g0185 . 64 270 Glutathione S-transferase Gene Family AT1G75270 63.0 7.1e-75 277.7
Lcy12g1111 . 60 214 Glutathione S-transferase Gene Family AT1G75270 60.9 1.0e-49 194.1
Lcy5g1378 . 14 149 Glutathione S-transferase Gene Family AT1G75270 61.2 1.6e-39 160.2
Lcy12g0185 . 9 270 Glutathione S-transferase Gene Family AT5G16710 68.6 4.8e-102 368.2
Lcy7g0839 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.1 8.0e-73 271.2
Lcy7g0840 . 3 211 Glutathione S-transferase Gene Family AT5G16710 57.9 2.3e-72 269.6
Lcy12g1111 . 49 216 Glutathione S-transferase Gene Family AT5G16710 50.3 2.3e-40 163.3
Lcy9g1538 . 1 268 Glutathione S-transferase Gene Family AT1G77290 70.9 2.2e-110 396.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000291 5 5 16 3 3 4 0 3 4 5 2 4 5 4 5 5 4 4 3 4 3 8 4 5 5 8 2 4 1 17 145