Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0687 | ATGGCGGACGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTCGGGATGCGAGCTAGAATAGCCCTGGCCGAGAAGGGCGTGGCCTACGAGTATGTGGAAGAAGATCTGAGGAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAGTTAAAAAGCAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCTCTGCTGCCGTCTGATCCTTACCAGAGGGCTCAGGCCAGGTTCTGGGTGGATTTCATCGACAAAAAGCTTTATGATCCTACGAGGAAGATATGGGGCAGCAAAGGAGAGGAGCAGGAGGCAGGCAAGAAGGAAGTGATAGGAATATTGAAGCAATTGGAAGAGTTTCTTGGGGAGAAGGCTTTCTTTGGAGGTGATTGTTTGGGATTTGTAGACATTGCTTTGATTGGATTCTACCCTTGGTTTTATACATATGAAACCATTGGGAACTTTAGTTTTGAGGCTGAGTGTCCCAAGACAGTGGCTTGGGCCAAGAGATGCTTGCAAAAGGACAGTGTTTCAAAGACCCTGCCTGACTCCAAGAAGGTCTATGACTTTGTGCTTCAAATGAAGAAACATCTTGGCCTTGACTAA | 660 | 46.36 | MADEVKLLDFWPSMFGMRARIALAEKGVAYEYVEEDLRNKSPLLLQMNPVKKQIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKLYDPTRKIWGSKGEEQEAGKKEVIGILKQLEEFLGEKAFFGGDCLGFVDIALIGFYPWFYTYETIGNFSFEAECPKTVAWAKRCLQKDSVSKTLPDSKKVYDFVLQMKKHLGLD | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6678324 | 6680468 | + | Maker00004166 | Lcy6g0687 | 635131 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0687 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - | |
Lcy6g0687 | 219 | SUPERFAMILY | GST C-terminal domain-like | 76 | 215 | IPR036282 | - | |
Lcy6g0687 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Lcy6g0687 | 219 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Lcy6g0687 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 209 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Lcy6g0687 | 219 | Gene3D | - | 88 | 219 | - | - | |
Lcy6g0687 | 219 | SFLD | Main.3: Omega- and Tau-like | 2 | 216 | IPR045073 | - | |
Lcy6g0687 | 219 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
Lcy6g0687 | 219 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Lcy6g0687 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Lcy6g0687 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 117 | 191 | IPR004046 | - | |
Lcy6g0687 | 219 | SFLD | Main (cytGST) | 2 | 216 | - | - | |
Lcy6g0687 | 219 | FunFam | Glutathione S-transferase U20 | 88 | 219 | - | - | |
Lcy6g0687 | 219 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
Lcy6g0687 | 219 | CDD | GST_N_Tau | 5 | 78 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g0687 | Lcy-Chr6:6678324 | Lcy6g0691 | Lcy-Chr6:6703209 | 3.55E-144 | dispersed | |
Lcy6g0687 | Lcy-Chr6:6678324 | Lcy6g0688 | Lcy-Chr6:6681094 | 2.28E-138 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy6g0687 | K00799 | - | csv:101218562 | 374.785 |