Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0692 ATGTCAAATTGTCAATCAAAGGAAAAGATTAAAAAGAAAGAAAGGGAAAATTTTCGAGAATGGCATTGGAATTTGCAGAAAATTAACCCCTTTTTTTTTTGGCTTCTCTCTCGAATTTTCCATTTTTCCCTCTTCCTAGAAAATGGGTCCACTCTCAAATCACTCAATCAATCTCAATATGTCTCAAACTCAGCTCTGAAGCGGCGTTCTGATCCATCTCCATTTCCACCCATTTTCGAGTTTCTTCTTTCTTATTTGGCAACAATGGCGGACGAAGTGAAGCTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGAGTCAGAATAGCCCTGGCCGAGAAGGGCGTGGCCTACGAATATGTGGACGAAGATCTGAGGAACAAGAGCCCTTTGCTTCTCCAGATGAACCCAGTTTACAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCTTTGTTGCCGTCTGATCCTTATCAGAGGGCTCAGGCCAGGTTCTGGGTGGATTTCATCGACAAAAAGCTTTTTGATTGTGGGAGGAAGATTTGGGCAACCAAAGGGGAGGAGCATGAAGCAAGCAAGAAGGAGTTGATAGAAATTTTGAAGCAATTGGAAGAAGTTGTTGGAGAGAAGGCTTACTTTGGAGGTGATTGTTTGGGATTTGTAGACATTGTTTTGATTGGATACTACACTTGGTTTTATACATATGAAACCATTGGGAACTTCAGCCTTGAGGCTGAGTGTCCCAAGACAGTGGGTTGGGCCAAGCGATGCTTGCAAAAGGACAGTGTTTCAAAGTCCTTGCCTGACCCCAAGAAGGTCTATGACTTTGTGCTTCAATTGAAGAAAAAGTATGGCCTTGACTGA 924 42.75 MSNCQSKEKIKKKERENFREWHWNLQKINPFFFWLLSRIFHFSLFLENGSTLKSLNQSQYVSNSALKRRSDPSPFPPIFEFLLSYLATMADEVKLLDFWPSMFGMRVRIALAEKGVAYEYVDEDLRNKSPLLLQMNPVYKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKLFDCGRKIWATKGEEHEASKKELIEILKQLEEVVGEKAYFGGDCLGFVDIVLIGYYTWFYTYETIGNFSLEAECPKTVGWAKRCLQKDSVSKSLPDPKKVYDFVLQLKKKYGLD 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6708281 6710679 + Maker00004200 Lcy6g0692 635136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0692 307 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 176 304 IPR010987 -
Lcy6g0692 307 SFLD Main.3: Omega- and Tau-like 89 305 IPR045073 -
Lcy6g0692 307 SFLD Main (cytGST) 89 305 - -
Lcy6g0692 307 SUPERFAMILY Thioredoxin-like 93 194 IPR036249 -
Lcy6g0692 307 SUPERFAMILY GST C-terminal domain-like 164 304 IPR036282 -
Lcy6g0692 307 Gene3D Glutaredoxin 89 175 - -
Lcy6g0692 307 Pfam Glutathione S-transferase, C-terminal domain 204 279 IPR004046 -
Lcy6g0692 307 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 91 170 IPR004045 -
Lcy6g0692 307 FunFam Glutathione S-transferase U20 176 307 - -
Lcy6g0692 307 Coils Coil 206 226 - -
Lcy6g0692 307 FunFam Tau class glutathione S-transferase 88 175 - -
Lcy6g0692 307 Gene3D - 176 307 - -
Lcy6g0692 307 Pfam Glutathione S-transferase, N-terminal domain 93 164 IPR004045 -
Lcy6g0692 307 CDD GST_C_Tau 177 300 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lcy6g0692 307 CDD GST_N_Tau 93 166 - -
Lcy6g0692 307 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 92 297 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0692 Lcy-Chr6:6708281 Lcy7g0233 Lcy-Chr7:2040262 9.57E-44 dispersed
Lcy6g0691 Lcy-Chr6:6703209 Lcy6g0692 Lcy-Chr6:6708281 5.42E-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0692 K00799 - csv:101217848 392.119