Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0693 ATGGATATGGACGACGATTTCTCCATCTTCCCTCCTGATTCAGATCTCGACTTCAGCTTCACCTCCACCTCCACCGCCACCGACCGCACCTTCGCCTCCTCCAGCGCCCGCAGCAGTCTCGCCAGAACCAGCCTTACTCTCAGCTTCAACGAATCCCGTCTCTCCGCCGCTGCTGCCGCCCTCAACCAACACCCCCACCGTCACTCCGACCCGCACTGGTCCGCCATCAAAGCCGCGACCACTCTCTCTTCCGACGGCCACCTCCACCTCCGCCACCTGAAACTCATCCGCCACCTCGGCACCGGCAACCTCGGCCGCGTCTTCCTCTGCCATTTGAGGGACAACGACCACGCCAGTTTCGCTCTCAAGGTCGTCGACAGGGAGGCTTTGAGCAACAAGAAGCTTTTGCAGGTTCAAACGGAAGCCGAGATTCTCGCCTTGCTGGACCACCCTTTTCTCCCCACTCTCTACACGCGTCTCGACGTCTCTCACTACACGTGCCTCCTCATCGACTACTGCCCCGCCGGCGACCTCCACTCCCTCCTCCGCAAACAGCCCGGAAACCGACTCTCCGTCTCGGCGGCCAGATTCTTCGCCGCCGAGGTCCTGGTGGCGCTCGAGTACCTTCACGCGCTCGGGATCGTCTACCGGGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCTGATTTCGACTTGTGCTTTAAGTCCGACGTGGTCCCCACTTTTCACACGTGGACGCGGCGGGGACCACAGGGCAGTGGCTGTTTTGGGTTGAGGACGGCGGCGGCGGCGGAGGAGGAGATTGTGGGGGAGTTTGTGGCGGAGCCGACGGCGGCGTTTTCGAAGTCGTGTGTGGGGACTCATGAGTATTTGGCGCCGGAGTTGGTGGCCGGCGGTGGCCACGGCAACGGCGTCGACTGGTGGGCGTTTGGGGTGTTCGTTTACGAGCTCCTGCACGGAACGACGCCGTTTAAAGGAGTCAACAAGGAGGGAACTCTAAGAAACATTGCGTTGTCGGACGGGGTGAAGTTCCGGGCTGTGGCGGCGGCGGAGGAAGAGGAGGGGATGGCGGAGGCGAGGGATCTGATAGAGCGGCTGCTGGTGAAGGATCCGGCTCGGCGGATGGGGTCCGGCAAAGGGGCGACTGAGATCAAACGGCATCCGTTCTTCGACGGGATAAAATGGCCGTTGATCCGGACGTACCGGGCGCCGGAGGTGTATGGGCTGATGAGAAAAGCCAGATCGCACGTGAGCCACGTGACTGGCGTGACCCACCGCATGAGGCGGCGGGGGTGGTGGAACTGGAAGAAGCTGAGTAACCGTTTAATGAAAAATGGAAGTTCCAGTAAATCTCATACCAATACCAATTATTACAGTTATAGCGCCAAAAATAAGAAGGGTTAA 1425 59.86 MDMDDDFSIFPPDSDLDFSFTSTSTATDRTFASSSARSSLARTSLTLSFNESRLSAAAAALNQHPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIRHLGTGNLGRVFLCHLRDNDHASFALKVVDREALSNKKLLQVQTEAEILALLDHPFLPTLYTRLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVSAARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVVPTFHTWTRRGPQGSGCFGLRTAAAAEEEIVGEFVAEPTAAFSKSCVGTHEYLAPELVAGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIALSDGVKFRAVAAAEEEEGMAEARDLIERLLVKDPARRMGSGKGATEIKRHPFFDGIKWPLIRTYRAPEVYGLMRKARSHVSHVTGVTHRMRRRGWWNWKKLSNRLMKNGSSSKSHTNTNYYSYSAKNKKG 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6734005 6735429 - Maker00004265 Lcy6g0693 635137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0693 474 ProSiteProfiles Protein kinase domain profile. 93 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy6g0693 474 Pfam Protein kinase domain 288 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy6g0693 474 Pfam Protein kinase domain 95 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy6g0693 474 SMART serkin_6 93 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy6g0693 474 Gene3D Phosphorylase Kinase; domain 1 92 176 - -
Lcy6g0693 474 PANTHER FLIPPASE KINASE 1-RELATED 39 416 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lcy6g0693 474 MobiDBLite consensus disorder prediction 450 474 - -
Lcy6g0693 474 Coils Coil 356 376 - -
Lcy6g0693 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy6g0693 474 SUPERFAMILY Protein kinase-like (PK-like) 91 465 IPR011009 -
Lcy6g0693 474 Gene3D Transferase(Phosphotransferase) domain 1 177 243 - -
Lcy6g0693 474 Gene3D Transferase(Phosphotransferase) domain 1 288 410 - -
Lcy6g0693 474 FunFam Probable serine/threonine-protein kinase cot-1 176 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0693 Lcy-Chr6:6734005 Lcy8g1981 Lcy-Chr8:46074575 1.63E-101 dispersed
Lcy6g0693 Lcy-Chr6:6734005 Lcy5g1341 Lcy-Chr5:31986784 1.45E-103 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66020 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0693 - - - 0.0