Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0711 ATGGAAAAATCACCCGGAGACGAGGACATCGCCAGAATCATATCTGAGATTGTGTCTGTGATGGTTTTGGTCTCCGATAAATCCTCAGAGGAATCGGTGAGGATGTTAACGACTTCAATAGATGAGCTTTGTTTTATTGAGGCTTTGATTTTGGTTGAGGATTTTGGAGGCATGGAGGTGTGGAAGAAGAAGAAGATGAAGGTGGTTTGGTTGATTGCAGTTCCAGTAATGGTGATTCTGATGTTACAGAGATTTTGGATGCCATCTTTGGACTTTAATCACCTCTGGACAACTGTTGTTGCTCAACATGGCTCCTCGAACAATGACAAGTTCATCAATGGCCTTCTTCCTCCAGGCTTCAACGAAAAATCCTGCTTGAGCCGATACCAATTGAATCTCTACAGAAAGCCCTCTCCCCACAAGCCTTCTTCCTCACTCCTCTCAAAGCTCCGCCGTTACGAAGCCCTCCACCGCCGCTGTGGCCCCAATTCACCTTCCTTCCACCGAGCCCTCGCCGGTCTCACTTCACCCAGAAACTCCACAACCCTATCGGACGATTGCAAATATGCCGTTATTTTGACTCGCGACGGCCTCGGCAATCGAATTCTTGCCATAATCTCTGCCTTCTTCTACGCCCTGATCTCCGACCGCGTCCTTCTAATCGACCGAGGCAATGCTCTTGATGATCTCTTCTGCGAGCCCTTTCTTGGATCGTCTTGGCTTCTACCGTCGGATTTCCCTCTCCGCCGCGAATTTGGGTCGTTCCGCCAGTCCTTCCCGGGGTCTTTTGGCAACATTTTGAGAAATGGGATGATGAAGAAAACCATTGAAGATTTGCCTCCGACTTATTTGTACCTTCATCTCTCTCACGATGCCGACGATTACGATAAACTCTTTTACTGCGACCGGCAGCAGAGTCTTCTGACGAAGGTGCCATGGCTGATTATGGAGACGAACAACTATCTAGTTCCAGGGCTTTTTCTAGTTTCTTCTTACAGAAAAGAGCTTGAGAAGCTATTTTCGACGAAGGACACTGTGTTCCACCATCTCGGTAGGTACCTCTTCCACCCGACGAACAGCGTCTGGGGGTTGATTTCGAGATCTTACAAGCCTTATCTCGCTAGAGCGAACGAAATGGTTGGGATTCAGATTCGGGTTTTCGGGTCGGAATCCGGGTCAGTTCAGGATCAGATGAATCAGCTTCTAGCTTGCACGCAGAAGAAGAAATTACTACCGGAGGTCGAGCCGACGTCGTCAGAGAAGACGAATTCCACCACTTCTCAGAGAGTGAAAGTCGTGCTGGTGACATCTCTAAGCTCTCAGTATTCAGAAACTCTAAAGGACATGTACTTGGAGCATCCAGCCGTCGACGGCGAGGTGGTGGCGGTGTACCAACCGAGCCACGAGGGGGTTCAGAGCTCCGACAAGATGCTGCACAACCGGAAGGCGCTGGCAGAAATATACCTTCTGAGCTTGAGCGACGTGCTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCACAGGGGTTGGCCGGAGTTAAGCCATGGATGTTGTACAAGGCGGAGGAGAAGGTGTTTTGGCCGATGCAGCCATGGCTGAAGTACAGAACGAGGAAAGAGACAACCGATGATTGGCCGTGCCGGCAGGCGGCGTCGATGGAACCTTGCTTCCACACGCCGCCGGTGTGCGATTGCAATGAGATGAAGAGAAGAGATGGAGGGAATGTTTTGCCGTTTGTAACGCATTGTGAAGATGCGAGTTGGGGCCTCAAGTTGGTTGATCTAGATTAG 1794 50.22 MEKSPGDEDIARIISEIVSVMVLVSDKSSEESVRMLTTSIDELCFIEALILVEDFGGMEVWKKKKMKVVWLIAVPVMVILMLQRFWMPSLDFNHLWTTVVAQHGSSNNDKFINGLLPPGFNEKSCLSRYQLNLYRKPSPHKPSSSLLSKLRRYEALHRRCGPNSPSFHRALAGLTSPRNSTTLSDDCKYAVILTRDGLGNRILAIISAFFYALISDRVLLIDRGNALDDLFCEPFLGSSWLLPSDFPLRREFGSFRQSFPGSFGNILRNGMMKKTIEDLPPTYLYLHLSHDADDYDKLFYCDRQQSLLTKVPWLIMETNNYLVPGLFLVSSYRKELEKLFSTKDTVFHHLGRYLFHPTNSVWGLISRSYKPYLARANEMVGIQIRVFGSESGSVQDQMNQLLACTQKKKLLPEVEPTSSEKTNSTTSQRVKVVLVTSLSSQYSETLKDMYLEHPAVDGEVVAVYQPSHEGVQSSDKMLHNRKALAEIYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEEKVFWPMQPWLKYRTRKETTDDWPCRQAASMEPCFHTPPVCDCNEMKRRDGGNVLPFVTHCEDASWGLKLVDLD 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6908455 6912091 - Maker00004288 Lcy6g0711 635155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0711 597 Gene3D - 184 233 - -
Lcy6g0711 597 Gene3D - 367 525 - -
Lcy6g0711 597 FunFam Galactoside 2-alpha-L-fucosyltransferase 185 236 - -
Lcy6g0711 597 Pfam Xyloglucan fucosyltransferase 530 566 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lcy6g0711 597 Pfam Xyloglucan fucosyltransferase 104 525 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lcy6g0711 597 PANTHER FUCOSYLTRANSFERASE 2-RELATED 64 595 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g2530 Lcy-Chr5:48092703 Lcy6g0711 Lcy-Chr6:6908455 2.34E-175 dispersed
Lcy6g0711 Lcy-Chr6:6908455 Lcy6g0712 Lcy-Chr6:6913627 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0711 K13681 - csv:101222105 872.078