Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0712 ATGAGAGAGAGAGTAAGAGATTGGAGGGAGAAATTGGAGATACAGAGTGAGAGCAAGAGCGAGAAACCAGAGTTAGAGCAAGATTGGAGAGAGAGCAAGAGATTGGAGAGAGAAATTGGAGAGAGAGTGAGAGATTGGAAAGAGAAATTGGAGAGAGAGCAAGAAGGCTCCACGAACGATGACAAGTTCATCAATGGCCTTCTTCCTCCAGGCTTCAACGAAAAATCCTGCTTAAGCCGATACCAATTGAATCTCTACAGAAAGCCCTCTCCCCACAAGCCTTCTTCCCCTCTCCTCTCAAAGCTCCGCCGTTACGAAGCCCTCCACCGCCGCTGTGGCCCCAATTCACCTTCCTTCCGCCGAGCCCTTGCCGGTTTCACTTCACCCAGAAACTCCACAACCCCGCCGGACGACTGCAAATACACTGTTATTTTGACTCGCGATGGCCTCGGCAACTGGATTCTTGCCATAGTCTCTGCCTTCTTCTATGCCCTGCTCAATGACCGCATCCTTCTAATCGACCGAGGCAATGCTCTTGATGATCTCTTCTGCGAGCCCTTTCTTGGATCCTCTTGGCTTCTACCGTCGGATTTCCCTCTCCGCCGCGAATTTGGGTCGTTCCGCCAGTCCTTCCCGGGGTCTTTTGGAAACGTTTTGAGAAATGGGATGTTGAAGAAAACCATTGAAGATTTGCCTCCGACTTATTTGTACCTTCATCTCTCTCACGATGCCGACGATTACGATAAACTCTTTTACTGCGACCGGCAGCAGAGTCTTCTGAAGAAGGTCCCATGGCTGATTATGGAAACGAATATCTATTTGGTTCCTGGGGTTTTTCTGGTTTCTTCTTTCAGAAAAGAGCTTGAGAAGCTCTTTCCGACGAAGGACACTGTGTTCCACCATCTCGGTCGGTACCTCTTCCACCCGACGAACGACGTATGGGGACTGATTTCGAGATCTTACAAGTCGTATCTTGCCCGAGCGAACGAAATGGTCGGGATTCAGATTCGAGTTTTTGGGTCGGAATCCGGGTCGGTTCAGGACCAGATGAATCAGCTTCTAGCTTGCACACAGAAGAATAAATTACTACCAGAGGTCGAGTCGTCGTCGTCGGAGAAGACGAATTCCACCACTTCTCAGAGAGTGAAGGTTGTGCTGGTGACGTCTTTGAATTCTCAGTACTCGGAAACCCTAAAGGACATGTACTTGGAGCATCCGACTGTCAATGGCGAGGTGGTTGCAGTGTACCAACCGAGCCACGAGGGGGTTCAGAGCTCCGACAAGATGCTGCACAACCGGAAGGCGCTGGCGGAGATATACCTCCTGAGCCTGAGCGATGTGCTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCGCGGGGGCTAGCCGGAGTTAAGCCATGGATGCTGTACAAGGCGGAGGAGAAGGTGTATGAGACGTTGCAGTCATGGTTGAAGTACAGAACGAGGAAAGAGATGACCGGTGATTGGCCGTGTCGGCGAGCGGCGTCGATGGAACCTTGCTCCCACACGCCGCCGGTGTGCGATTGTGATGAGATGAAGAGAACAGATAGAGGGAATGTTTTGCCATTTGTGACGCATTGTGAAGATGAAGATGTGGTCTGCAAGACAGAAGAAACCTGCACACTGGTGTGGTGCTTGCCACACTGCCTCCGATCCTTAAGTCAAAAGGCTGAAGGAGGAGAGCGAAAGAGCAAAGTAAGAGGAAAGAGTTCAATGAGTTTCAGGATTCCTTTTTCAGTGATCAAGAAGGGTTTAAATACCTGCTCCTACTCTGGATTTTCAAGTGTTCAGAGGCGATCCAAGGCTGAATCGCGTGGAATCGGGGCACCTCGGACCAAACAGAGAGGGGAGACCTCGGCCCGCGCAAGCGGGTCGAGGGTCGGCCTTGGGCCAAGGCCGAGGCCGAGCAGGGGTCAAGCCAAGGCCCGGTCCCTCCGACCTTGGCCTGACCTTTTGGCCCGTTTTGCCTTCGGAGTCCATTTTTCAATCTTATTTCTGGGCTCATGTCGGGTTGTCCTCGTCAGCTCGTTGTACATCGAAATTAGATGTCTAGTCTTTTCGTTTCTATATGGATCAATTTTTTGTCCTTAA 2118 51.18 MRERVRDWREKLEIQSESKSEKPELEQDWRESKRLEREIGERVRDWKEKLEREQEGSTNDDKFINGLLPPGFNEKSCLSRYQLNLYRKPSPHKPSSPLLSKLRRYEALHRRCGPNSPSFRRALAGFTSPRNSTTPPDDCKYTVILTRDGLGNWILAIVSAFFYALLNDRILLIDRGNALDDLFCEPFLGSSWLLPSDFPLRREFGSFRQSFPGSFGNVLRNGMLKKTIEDLPPTYLYLHLSHDADDYDKLFYCDRQQSLLKKVPWLIMETNIYLVPGVFLVSSFRKELEKLFPTKDTVFHHLGRYLFHPTNDVWGLISRSYKSYLARANEMVGIQIRVFGSESGSVQDQMNQLLACTQKNKLLPEVESSSSEKTNSTTSQRVKVVLVTSLNSQYSETLKDMYLEHPTVNGEVVAVYQPSHEGVQSSDKMLHNRKALAEIYLLSLSDVLVTSDWSTFGYVARGLAGVKPWMLYKAEEKVYETLQSWLKYRTRKEMTGDWPCRRAASMEPCSHTPPVCDCDEMKRTDRGNVLPFVTHCEDEDVVCKTEETCTLVWCLPHCLRSLSQKAEGGERKSKVRGKSSMSFRIPFSVIKKGLNTCSYSGFSSVQRRSKAESRGIGAPRTKQRGETSARASGSRVGLGPRPRPSRGQAKARSLRPWPDLLARFAFGVHFSILFLGSCRVVLVSSLYIEIRCLVFSFLYGSIFCP 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6913627 6916728 - Maker00004238 Lcy6g0712 635156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0712 705 Gene3D - 317 482 - -
Lcy6g0712 705 MobiDBLite consensus disorder prediction 1 31 - -
Lcy6g0712 705 Pfam Xyloglucan fucosyltransferase 53 518 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lcy6g0712 705 MobiDBLite consensus disorder prediction 610 651 - -
Lcy6g0712 705 MobiDBLite consensus disorder prediction 46 65 - -
Lcy6g0712 705 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 540 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0712 Lcy-Chr6:6913627 Lcy10g1141 Lcy-Chr10:33820476 6.51E-17 dispersed
Lcy6g0711 Lcy-Chr6:6908455 Lcy6g0712 Lcy-Chr6:6913627 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0712 K13681 - csv:101222105 791.186