Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g0733 | ATGTCACAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTACTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGAGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCCGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAATCCTTCAAAAATGAAAAAAGCTCAAGCAGAGATTGATTTAGTTCTTGGCAAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATCGTTGCAGAGAGTCTTCGTTTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGGAGGATACAATGGTGACAAAAATGGATATGCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAACCCTCAAGAATTTGAACCAGAGAGATTTGAGGTAATGAGGGCGAGCGAGGGAATCGAAGGATGGGATGGTTTCGACCCATCTAGAAGCCCCGGAGCTCTATATCCGAACGAGATTGTATCAGACTTTTCCTTCCTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTCTAATGGAATCAACTATAGCACTGGCCATGTTGCTGCAAAAGTTTGATGTGGAACTGAAAGGAAGTCCAGAATCTGTGGAACTAGTCACTGGGGCCACCATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATCACACAAGTAA | 819 | 44.08 | MSQEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGKGRPTFELLKGLKYIRLIVAESLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWDNPQEFEPERFEVMRASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRRRSHK | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7122775 | 7126335 | - | Maker00004229 | Lcy6g0733 | 635177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g0733 | 272 | Gene3D | Cytochrome P450 | 3 | 272 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | SUPERFAMILY | Cytochrome P450 | 28 | 269 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 209 | 218 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lcy6g0733 | 272 | PRINTS | P450 superfamily signature | 50 | 67 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | P450 superfamily signature | 102 | 113 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | P450 superfamily signature | 216 | 227 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | P450 superfamily signature | 207 | 216 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | Pfam | Cytochrome P450 | 17 | 259 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | E-class P450 group I signature | 39 | 56 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | E-class P450 group I signature | 59 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | E-class P450 group I signature | 216 | 239 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PRINTS | E-class P450 group I signature | 206 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy6g0733 | 272 | PANTHER | CYTOCHROME P450 FAMILY 4 | 11 | 269 | IPR050196 | GO:0009507(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g1301 | Lcy-Chr1:12435542 | Lcy6g0733 | Lcy-Chr6:7122775 | 5.18E-43 | dispersed | |
Lcy6g0733 | Lcy-Chr6:7122775 | Lcy1g2001 | Lcy-Chr1:25201728 | 3.18E-30 | dispersed | |
Lcy6g0733 | Lcy-Chr6:7122775 | Lcy6g1081 | Lcy-Chr6:12030175 | 1.16E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy6g0733 | K24543 | - | csv:101210292 | 525.783 |