Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0733 ATGTCACAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTACTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGAGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCCGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAATCCTTCAAAAATGAAAAAAGCTCAAGCAGAGATTGATTTAGTTCTTGGCAAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATCGTTGCAGAGAGTCTTCGTTTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGGAGGATACAATGGTGACAAAAATGGATATGCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAACCCTCAAGAATTTGAACCAGAGAGATTTGAGGTAATGAGGGCGAGCGAGGGAATCGAAGGATGGGATGGTTTCGACCCATCTAGAAGCCCCGGAGCTCTATATCCGAACGAGATTGTATCAGACTTTTCCTTCCTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTCTAATGGAATCAACTATAGCACTGGCCATGTTGCTGCAAAAGTTTGATGTGGAACTGAAAGGAAGTCCAGAATCTGTGGAACTAGTCACTGGGGCCACCATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATCACACAAGTAA 819 44.08 MSQEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGKGRPTFELLKGLKYIRLIVAESLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWDNPQEFEPERFEVMRASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRRRSHK 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7122775 7126335 - Maker00004229 Lcy6g0733 635177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0733 272 Gene3D Cytochrome P450 3 272 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 SUPERFAMILY Cytochrome P450 28 269 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 209 218 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy6g0733 272 PRINTS P450 superfamily signature 50 67 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS P450 superfamily signature 216 227 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS P450 superfamily signature 207 216 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 Pfam Cytochrome P450 17 259 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS E-class P450 group I signature 39 56 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS E-class P450 group I signature 59 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS E-class P450 group I signature 216 239 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PRINTS E-class P450 group I signature 206 216 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy6g0733 272 PANTHER CYTOCHROME P450 FAMILY 4 11 269 IPR050196 GO:0009507(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1301 Lcy-Chr1:12435542 Lcy6g0733 Lcy-Chr6:7122775 5.18E-43 dispersed
Lcy6g0733 Lcy-Chr6:7122775 Lcy1g2001 Lcy-Chr1:25201728 3.18E-30 dispersed
Lcy6g0733 Lcy-Chr6:7122775 Lcy6g1081 Lcy-Chr6:12030175 1.16E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0733 K24543 - csv:101210292 525.783