Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0754 ATGTCAGCGGTAATCCGGGTCGGGTCGGGTCAACAAAGTTCAGCGTATTGCAAAACAGTTTTCTCTTTCAAAAACTCGAAGAAGATGGCCAGAGAAAACTTTGGTTTCTGGCTATTTATGATTGCATCTCTACTGCTTTTCCTCAAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGAAGCTGGTGCCAAGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGGTTCGGTGCTGGGATCGACAATTGGTTGATTCAACTTGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTCCAGCGCAGGGACACTCGTTTAGGTTCATCTAGGAAAATGGTCACTGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAAAAATTCAATCCGGATTTTTATAATTGGAACAGAATCAAGGTTCGTTACTGTGATGGATCTTCTTTTACCGGAGACATTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCGACAACCTACTCGCCAAAGGAATGAAAAATGCGAAAAACGCTATTCTCTCGGGTTGTTCAGCGGGTGGATTAAGTTCCATCTTGCATTGTGATAACTTCAAATCTCTACTTCCTCCTACTACTAAAGTAAAGTGCCTCTCAGATGCAGGATACTTTATCAATGCGAAAGACGTCTCAGGAGCACAGCATATTGAGGACTTCTATAGTGATGTAGTTGCCACCCATACTTCTGCTAGGAATTTGCCTGTATCATGCACTTCGAAAATGAAACCTGAGATGTGTTTCTTTCCCCAAAATGTAGTTCAGCTCATTCAAACTCCAATCTTCCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAATATTCTGGCGCCTGGTGTTGCCGATCCACACGGTACTTGGCACGACTGCAAGCTCGACATAAAAAACTGCTCGCCTATTCAGCTTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGTGTTGGAAGCTCTTTATCAAGAGGATTGTTCATAGATTCTTGCTATGCCCATTGCCAAACCGAAATGCAGGAGACATGGTTAAGAGCGGATTCTCCCATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTTTGACAGGAGTCCGTTCCAGAAGATCGACTGTCCTTACCCGTGCAATCCGACTTGCCACAACCGCATTTTCGAAGCGAAAGACAACCTCGAATGA 1281 44.18 MSAVIRVGSGQQSSAYCKTVFSFKNSKKMARENFGFWLFMIASLLLFLKAQCINVGITYVQEAGAKGAVCLDGSPPAYHFSDGFGAGIDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSRKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDIEAVDPATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEDFYSDVVATHTSARNLPVSCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQLRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTPIAKAVGDWFFDRSPFQKIDCPYPCNPTCHNRIFEAKDNLE 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7417325 7421218 - Maker00029805 Lcy6g0754 635198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0754 426 PANTHER NOTUM-RELATED 48 416 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Lcy6g0754 426 Pfam Pectinacetylesterase 50 400 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g2394 Lcy-Chr2:50567219 Lcy6g0754 Lcy-Chr6:7417325 5.00E-159 dispersed
Lcy6g0158 Lcy-Chr6:1483112 Lcy6g0754 Lcy-Chr6:7417325 4.06E-113 dispersed
Lcy6g0754 Lcy-Chr6:7417325 Lcy7g0008 Lcy-Chr7:131318 7.05E-67 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0754 K19882 - csv:101214431 780.4