Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0931 ATGGCTCGATCTCGAAGCTCTCTCTTTGTTTTTGCTCTTCTTGCCTTGGCTTCGGTTTGTTTCTCTCACAAGACTGGCGGCGGCGGTGGCGGTTATGGCGGTTATTTGTATCCTCAATTCTATGATCATTCTTGTCCAAGAGCTCAAGAGATAGTGAAGTCCATTGTGGCCAAAGCTTTCGCTAAGGAAGCTCGTATTGCTGCTTCATTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGCTGTGATGGTTCGATTTTGTTAGACAGCAGTGGGACAATAACCAGTGAGAAAAGGTCGAATCCAAACAGAAACTCTGCCAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCTCAAACTGTTTCTTGTGCTGATATCTTGGCCATTGCTGCAAGAGACTCCACCGTCATAACAGGAGGGCCTGGCTGGGAAGTTCCACTAGGAAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGCTCCAACAATGACATTCCTGCTCCAAACAACACATTCCAAACCATTCTCACCAAGTTCAAGCGACAAGGCCTTGACATTGTTGATCTTGTTGCTCTCTCAGGAAGCCACACGGTCGGAAACTCTCGATGCACTAGCTTCAGGCAACGGCTCTACAACCAATCCGGCAATGCCGAGCCCGACCCTTCTCTCGATCCATCGTACGCGGCTGAATTGCGCAAGCGATGCCCGAGATCGGGGGGTGACCAGAACCTCTTTTTCCTGGACTTTGTCAGCCCGACAAAGTTCGACAACTACTACTTCAAGAACCTTTTGGCTGGAAAGGGACTGCTGAACTCGGATGAGGTTCTGTTGACGAAGAATGAGCAATCGGCGGAGTTGGTGAGGACATATGCAGAGAATTCTGAGGTGTTTTTTGAGCAATTTGCCAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTGACTGGCTCAAGGGGTGAGATCAGAAAGAACTGCAGGAAAGTTAACAGAAATTAG 1017 47.79 MARSRSSLFVFALLALASVCFSHKTGGGGGGYGGYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDGSILLDSSGTITSEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPGWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTVGNSRCTSFRQRLYNQSGNAEPDPSLDPSYAAELRKRCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAGKGLLNSDEVLLTKNEQSAELVRTYAENSEVFFEQFAKSMVKMGNISPLTGSRGEIRKNCRKVNRN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9470773 9472728 + Maker00029979 Lcy6g0931 635375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0931 338 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601(InterPro)
Lcy6g0931 338 Pfam Peroxidase 52 300 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 Gene3D Peroxidase, domain 2 173 316 - -
Lcy6g0931 338 ProSiteProfiles Plant heme peroxidase family profile. 35 336 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 Gene3D - 40 336 - -
Lcy6g0931 338 SUPERFAMILY Heme-dependent peroxidases 36 336 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Lcy6g0931 338 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy6g0931 338 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 MobiDBLite consensus disorder prediction 150 171 - -
Lcy6g0931 338 FunFam Peroxidase 173 315 - -
Lcy6g0931 338 PANTHER PEROXIDASE 72-RELATED 11 335 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy6g0931 338 FunFam Peroxidase 39 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0864 Lcy-Chr12:11985169 Lcy6g0931 Lcy-Chr6:9470773 1.31E-85 dispersed
Lcy5g2024 Lcy-Chr5:43257386 Lcy6g0931 Lcy-Chr6:9470773 4.99E-61 dispersed
Lcy6g0931 Lcy-Chr6:9470773 Lcy8g1703 Lcy-Chr8:43592359 1.95E-103 dispersed
Lcy9g1774 Lcy-Chr9:42933856 Lcy6g0931 Lcy-Chr6:9470773 2.56E-63 dispersed
Lcy12g1914 Lcy-Chr12:40422297 Lcy6g0931 Lcy-Chr6:9470773 1.35E-70 transposed
Lcy4g0061 Lcy-Chr4:907297 Lcy6g0931 Lcy-Chr6:9470773 2.24E-72 transposed
Lcy1g0670 Lcy-Chr1:5730655 Lcy6g0931 Lcy-Chr6:9470773 1.21E-188 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0931 K00430 - csv:101223204 598.201