Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0946 ATGGAAGCCAATTTCGAGGAGCTGAGGCAAAGCTTCAGAAGTGGAAGAACAAGGAGTTTGGAGTGGAGAAAAAACCAGCTGATTTCCTTGATTCAGTTCATCCACGACAAAGAAAACGCCATTTTTGAAGCTCTGTACCAAGATCTCGGGAAGCATCCTGTGGAAATTTTTCGAGATGAGTGGTTTAAGGTTGGCGTTGTTCTGAAATCTGCAAATAATGCTCTGTGCTGTTTAAAGAAATGGATGGCCCCTCAAAAGAAATATGTGCCATTACTGTTCTTCCCAGCAAAAGGAGAAGTTTTGTCAGAGCCATTTGGCCTTGTCCTCATAATTTCGTCTTGGAACTTTCCACTTTCTTTGGCATTGGATCCATTAATTGGAGCGATATCGGCGGGCAACACGGCGGTCCTAAAACCGTCGGAATACGCTCCGGCTTGCTCTTCTTTGCTTGCTGCAACACTCCCTCTTTACCTTGACAATAAAGCCATCAAGGTTGTGGAGGGTGGAGCTGATGTTAGTGAACAACTTCTACAGCATAAGTGGGATAAGATCTTCTTCACTGGGAGTCCGAAAGTTGCTAGAATTGTGATGTCTGCAGCTGCAAAGCATTTAACTCCTGTTACTTTAGAGCTTGGGGGAAAATGCCCTGCAATCTTTGATTACTCCTCTGTTCATCCCAATATGAAGGTAGCAGTCAAGAGAATCGTCGGAGGAAAGTGGGGGCCGTGCTCCGGGCAGGCGTGCATAGGGATAGATTATGTTCTTGTGGAGGACAAGTTTGCTTCAGAATTGATCGAGTCGTTAAAGCGAATACTCAAGAAGTTTTATGGAGAAAACTCGAAAAACTCGGCGAGTCTGGCTCGAATTGTTAATGAGCAACATGTTGAAAGAATCAGCAATCTTCTCAAAGACCCCAAGGTTGCTGCTTCCATTGTCCATGGTGGTTCCACAGACAAACAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCAATCAATGCCGATATCATGACCGAAGAAATCTTCGGTCCCCTGTTACCGATAATCACATTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACTCAAGACCAAAACCTCTAGCTCTCTATGCCTTCACGGAAGATGAAACTTTCAAGAAACGGATTCTATCGGAAACGTCGTCGGGAAGTGTCACATTCAATGATACTATGGTTCAGTTTGTGTGCGATTCGCTACCATTCGGCGGTGTCGGTCAGAGCGGTTTCGGGAGTTACCATGGCAAGTATTCTTTTGATACATTCAGCCATGAAAAAGCAGTGTTGCAGAGAAGCTATTTGCTAGAACTCGAGCCACGATATCCGCCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCGTATCGATTCGACTATTTCGGGCTGGCACTTCTCCTTTTGGGGTTAAAAAAGTAG 1443 44.21 MEANFEELRQSFRSGRTRSLEWRKNQLISLIQFIHDKENAIFEALYQDLGKHPVEIFRDEWFKVGVVLKSANNALCCLKKWMAPQKKYVPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKPSEYAPACSSLLAATLPLYLDNKAIKVVEGGADVSEQLLQHKWDKIFFTGSPKVARIVMSAAAKHLTPVTLELGGKCPAIFDYSSVHPNMKVAVKRIVGGKWGPCSGQACIGIDYVLVEDKFASELIESLKRILKKFYGENSKNSASLARIVNEQHVERISNLLKDPKVAASIVHGGSTDKQKLFIEPTILLNPPINADIMTEEIFGPLLPIITLNKIEESIEFINSRPKPLALYAFTEDETFKKRILSETSSGSVTFNDTMVQFVCDSLPFGGVGQSGFGSYHGKYSFDTFSHEKAVLQRSYLLELEPRYPPWNDFKLKFIRLAYRFDYFGLALLLLGLKK 480
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 9768399 9771118 + Maker00030122 Lcy6g0946 635390
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0946 480 FunFam Aldehyde dehydrogenase 213 416 - -
Lcy6g0946 480 FunFam Aldehyde dehydrogenase 9 219 - -
Lcy6g0946 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620(InterPro)
Lcy6g0946 480 SUPERFAMILY ALDH-like 2 452 IPR016161 GO:0016491(InterPro)
Lcy6g0946 480 PIRSF ALDH 1 473 IPR012394 GO:0006081(InterPro)
Lcy6g0946 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 434 IPR016162 GO:0016491(InterPro)
Lcy6g0946 480 Pfam Aldehyde dehydrogenase family 6 436 IPR015590 GO:0016491(InterPro)
Lcy6g0946 480 PANTHER ALDEHYDE DEHYDROGENASE 3 476 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0946 Lcy-Chr6:9768399 Lcy8g2098 Lcy-Chr8:47168691 6.25E-201 dispersed
Lcy6g0946 Lcy-Chr6:9768399 Lcy12g0802 Lcy-Chr12:10447106 1.92E-42 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0946 K00128 - csv:101221321 835.099