Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g0963 ATGGCTTCTTCTTCTTCTCCTAATTTGTCCTTTGGGATCTCTGCTTCTGGCTTTTCCGACCCCTTTCAGGTCGCCGGGCCGCCGGATTCTGCCGACCCGGCTTTCCATTTTCCCAATTTGGAGCATCCCTCGGCTGCGTTTAGGTTTTATCCTAACTTTGGCGGCGGCGTCGGCGGCGGAGAGTTCGACTCCGATGAGTGGATGGATAGTTTGGTCGGCGGTGGAGATTCGACGGATAGCTCAAATCTGCAGTCTGGTTGTGATGCGTATGGCGAGTTTGGTATTTATGGTGCGGATCCCTTTAATGGCTCTCCTAGTCGACTCAGTGTCGCTTGCTCTCCGCCGGCTGAGTTCAACCGAGTTGTGCTTGCGGAAAGTTCGTATAAGACAAATAGCGTTCCGCCGCCGGCGTGGAGTTCGCCTCCACCGCCGTCGTCTCCACCACCAGTCAAGGATGCGAGAGTAGCCAAGCCAGCGGCGGAGAAGATGCAGAAGAACGACGTTGTTGAAGCTTCGTCGAGTGCGCCCGAAACCGAGTTACCGTTGCCGCCGCTTCTGAAAGTGTTGCTTGATTGTGCGCGCCTCTGCGATTCCGAGCCCGACAGAGCCGCGAAAACTCTCGATCGGATCGGTAAATCGTTGCGAGAACATGGAGATCCGATTGAGCGAGTGGCGTTTTACTTTGGCGAGGCTCTTCGGTACAGATTATCCGCGACGGCGAGGGATAATTTCCTGGATTATTCAACGGAGAGCGACGCTAATTCCGAAGATTTCTTGCTGTCTTACAAAGCTCTGAACGACGCTTGTCCCTACTCCAAGTTCGCGCATCTCACAGCGAACCAAGCAATTCTTGAAGCTACGCAGAGAGCCAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAGGGCGTTCAATGGGCGGCGCTATTGCAGGCTTTGGCCACGCGAGCCACCGGAAAGCCTACCAGAGTTCGTATCTCCGGAATACCAGCGCCGTCGCTCGGAGATTCACCGGCGGCGTCGCTGTACGCCACTGGCAATCGACTCTCCGAGTTCGCAAAGCTTCTGGAACTGAATTTCGAGTTTGAACCGATTCTAACGCCGATTGAGGACCTCGACAAATCGAGCTTCAGCATTCAATCGGACGAGGTACTGGCCGTGAATTTCATGCTTCAATTGTACAATCTCCTCGACGAGGTTCCGGTTGGAGTTCATAATGCTCTCCGATTAGCGAAATCGCTAAGCCCTAAAATAGTAACTCTCGGCGAGTACGAGGCGAGTTTGAACCGGATCGGATTCTACAATCGCTTCAAGAACGCATTGAAATACTATTCCGCCGTTTTCGAATCGCTAGAGCCAAACCTGCCTCGAGACTCGCCGGAAAGACTCCAGTTAGAGAAACTGCTGCTCGGCCGTCGAATCGCCGGCGTGGTTGGAAGCAAAAGAAGAGTACGCATGGAAGACAAAGAGCAGTGGAAGAATTTGATGGAAAGCTCCGGATTCGAAGCCGTAGCGCTCAGCCATTACGCCATTAGTCAGGCGAATATACTTCTATGGAACTACAATTACAGATTGTTGAAGTTTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTGAAGAGTCCTTGCTTCTCTGAATTTTCTGACTTGGCCTTGGAGCTTCTGCCTGAATCTGGATCCCCCAAAATGAATGGTGGTCTCCTCTATTTATAG 1734 51.96 MASSSSPNLSFGISASGFSDPFQVAGPPDSADPAFHFPNLEHPSAAFRFYPNFGGGVGGGEFDSDEWMDSLVGGGDSTDSSNLQSGCDAYGEFGIYGADPFNGSPSRLSVACSPPAEFNRVVLAESSYKTNSVPPPAWSSPPPPSSPPPVKDARVAKPAAEKMQKNDVVEASSSAPETELPLPPLLKVLLDCARLCDSEPDRAAKTLDRIGKSLREHGDPIERVAFYFGEALRYRLSATARDNFLDYSTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATQRASKIHIVDFGIVQGVQWAALLQALATRATGKPTRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILTPIEDLDKSSFSIQSDEVLAVNFMLQLYNLLDEVPVGVHNALRLAKSLSPKIVTLGEYEASLNRIGFYNRFKNALKYYSAVFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGSKRRVRMEDKEQWKNLMESSGFEAVALSHYAISQANILLWNYNYRLLKFSSLEGSSVFKKSWGLEVLKSPCFSEFSDLALELLPESGSPKMNGGLLYL 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10061316 10064920 + Maker00030069 Lcy6g0963 635407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g0963 577 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 526 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lcy6g0963 577 ProSiteProfiles GRAS family profile. 176 553 IPR005202 -
Lcy6g0963 577 Pfam GRAS domain family 186 528 IPR005202 -
Lcy6g0963 577 MobiDBLite consensus disorder prediction 135 151 - -
Lcy6g0963 577 MobiDBLite consensus disorder prediction 131 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0963 Lcy-Chr6:10061316 Lcy6g1707 Lcy-Chr6:32744414 6.69E-53 dispersed
Lcy6g0963 Lcy-Chr6:10061316 Lcy1g0718 Lcy-Chr1:6147137 1.43E-216 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20289 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g0963 - - - 0.0