Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g1863 AAACTGATCGAAGATGATGAAATTTTACAGCGCTCGGCTCTCAGTGATCCCCTAGAGAAGGATTTGGGTTCAAAACTAGAGACAGGAAGCAAAAGCAGCCAGGATATGGTTTTTCGAGCTGATAAGATTGATTTCAAGAGTTGGGATATTCAGCTGGACAAGCACTTGAGCAGGGCTTGGTCAAGGGACAGAGAAGTGCCGGCCAAAAAGGACGAATGGGAGATTGACTTGTCTAAGCTTGATATAAGATATGTTAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTTGATTGGGGTGAGGATGGTGTTTCCTCAGTTGCTGAAATTGCTGCTCTTCGAGCTTCTTTTCGCCAGGAAGTTGCTGTTTGGCATAAGCTTGACCATCCCAATGTTGCGAAGGCGGAACCGAGGTGGCTGGAGGCTGCACGGACCGAACGGAGTCGGTGGGACCCGGCCAGCGCACGGCCTCGGCCCATGGCCGAGGCCGAGCAAGGGGGTAGGGCAAAGTGCCCGACCCCTTCGGTCTTGACCCGTCCCATTTGCCGGTTTCGCCTCTGGGGTCCATCTCTCAACCTTATTTCTGCTCGGTTGTCCTCGTCAGCCCCTTGTACCCGGAGTGAAATTGAGATGAAAAAGGTGAGGGATTACAAAAGTGGTGCTGGTCGGCCTCGGGAAGAGGCCGAGCACAGCGAGACCCCCGTACTTGGTTATTCGGAGTGCTTCTTTCCAGAGGTGCTCGGTCTCGACCTCCGCCAGGTGAGCTTGACTTACATGAAGTGTTTGAGCAAGTGTTTGAGCTCTGAGGCTCGCATGAAGCGTGGGCTCTATAGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCATGGAGGCGTGGGCACTATAGGCTCGCATGA 933 52.41 KLIEDDEILQRSALSDPLEKDLGSKLETGSKSSQDMVFRADKIDFKSWDIQLDKHLSRAWSRDREVPAKKDEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGEDGVSSVAEIAALRASFRQEVAVWHKLDHPNVAKAEPRWLEAARTERSRWDPASARPRPMAEAEQGGRAKCPTPSVLTRPICRFRLWGPSLNLISARLSSSAPCTRSEIEMKKVRDYKSGAGRPREEAEHSETPVLGYSECFFPEVLGLDLRQVSLTYMKCLSKCLSSEARMKRGLYRLACRRGHYRLAWRRGHYRLA 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38871793 38874937 + Maker00027665 Lcy6g1863 636307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g1863 310 Gene3D Phosphorylase Kinase; domain 1 68 147 - -
Lcy6g1863 310 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 146 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Lcy6g1863 310 MobiDBLite consensus disorder prediction 158 184 - -
Lcy6g1863 310 SUPERFAMILY Protein kinase-like (PK-like) 67 147 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1584 Lcy-Chr3:42991060 Lcy6g1863 Lcy-Chr6:38871793 3.40E-86 dispersed
Lcy6g1863 Lcy-Chr6:38871793 Lcy9g1326 Lcy-Chr9:38049193 1.53E-20 dispersed
Lcy13g0464 Lcy-Chr13:5542606 Lcy6g1863 Lcy-Chr6:38871793 6.30E-22 transposed
Lcy1g2191 Lcy-Chr1:31696811 Lcy6g1863 Lcy-Chr6:38871793 9.81E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g1863 - - - 0.0