Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g1885 | ATGTATTATTTTAATCTCGCTCTCTTTCAATTAATTTTTTTTTTCCCTGGGTTCCATATACATAGTAAAAAAGTAGCTGAGGAAGCAATTTTCTACTCCTATGCAAGATGTTTCAATGGTTTTGCAGCCATACTCAATGAGAAAGAAGCAGCAGATTTAGCGAGAAGCCCACAAGTGATATCTGTGTTCGAAAACAAGGGAAGAAAAAAGCACACAACAGAGTCATGGAGTTTTCTTGGGGTGGAGAGTGAAGAAGGAATTCCTTCCAACTCCATTTGGAATCCAGCAGACTTTGGTCAAGATATGATTATAGCCAACATAGACACAGGTGTTTGGCCAGAATCGGAGAGCTTTAGCGACGAAGGGTATGGACCCATACCATCAAAGTGGAAAGGCACGTGTCCAACCGACGACACCAACTTTCAGTGTAACAGGAAGCTTATTGGAGGAAGGTATTTCTACAAAGGATATGAAGCCGAAGGAGGCATTCTCAACAATACTTCACGTTCCCTACGCGATTACGAAGGCCATGGAACCCACACTCTCTCCACCGCCGCCGGCAACTTCGTCCCCGGAGCCAACATTTTCGGCCATGGAAACGGCACGGCCAAAGGCGGCGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGTCTGCTGGCCTTCCTTACCCTCCGGAGAGTGCTTCGATGCTGATACCCTCGCCGCCTTCGAAGCTGCTGTTGCCGACGGAGTCGACGTCATATCCGCTTCCATCGGTGGAGGCGACCAAGACTTCCTCGACGATCCACTTGCCATCGCCGCCTTCCATGCCGTTCAACAAGGCGTCGTCGTTGTCTGCTCCGCCGGAAACACAGGTCCTTTTCCGGGGACCGTCTCCAACGTCGCCCCGTGGGAGATCACCGTCGCTGCGAGCACCAACGGCAGAGATTTTGTCAGTTACGTCGCCCTTGGAAATAACATAAGTCTAAAGGGCACAAGCCTTTCTTCAGTTGGCGCATCAACTGGACAATTCTATCCATTGATCGGTTCTGGGGATGCGAGATTCAGCAATGTCAGCGATTACGATGCGCAATTTTGTGGTGAGGGAACGCTTGATCCGAACAAGGTAAAGGGGAAGATCTTGATTTGCCTTACAGGGGAACTTGCAGGGGTTGACAAGGGTTACCATGCTGCTCAAGCAGGTGCTGTTGGTATGATTGTGGCTAACGACATTGAAAACGGTGACAAAATCAATCCTGAGTTACATTTCCTTCCAGCTTCGGATATAACCTATAGCGATGCCGAATTGCTTTACCAATACATGAACTCCACCAAGACACCAGTGGCTCAGATAATGAATGTAACGATAGATGTGGGACTAAAACCAGCTCCAGTCATTGCTCCATTCTCATCCAGAGGTCCCAACCCATTAGAGAAGTCCATCCTCAAGCCTGACATAACAGCCCCGGGTGTGAACATTCTGGCGTCTTACCCCACCGGAAGAGCCCCGACAGCTTCCCTCTATGACCAACGGCGCATCCCGTTTAATATACTCGCCGGTACCTCCATGGCTTGCCCTCACATCTCTGGCATTGTAGCCCTTCTCAAGTTCATACATCCCGATTGGAGCCCTGCTGCAATCAAATCTGCCCTCATGACCACTGCCAAAACAAGTGACAACAACTTGCAGTCGATTCTCAACTCGACCAAACTCGAAGAAACCCCATTCGCTTATGGGGCAGGACATGTTCGCCCGAATGACGCAATGGACCCTGGCCTTGTTTATGATGCTTCAGTTGATGACTATTTGAATTTCTTGTGTGCTCGAGGTTACAATGCAAGTGAAATCAAAAGATTCTACGAGAAACCATTTGTTTGTGCAAAATCATTTGAAGTTACAGATCTCAACTATCCATCTATCTCAATTCCAAATTTAAATGTGAGTGCTCGGGTAACAATCAATAGAAGAGTTAAGAATGTGGGAAGTTCAGGCACATATATGGCGCGAGTCGAGGTGCCACCAGGAGTTGTGGTATCGGTTGAGCCAACTATGTTGCACTTTAGAAGTGTGGGTGAAGAGAAGGCATTCAAGGTCATATTTCAAAACACAGGAAATGTGGAACATGAAGGTTATATGTTCGGGACATTGATATGGACCGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATGAATTTGGGACGATGA | 2187 | 47.83 | MYYFNLALFQLIFFFPGFHIHSKKVAEEAIFYSYARCFNGFAAILNEKEAADLARSPQVISVFENKGRKKHTTESWSFLGVESEEGIPSNSIWNPADFGQDMIIANIDTGVWPESESFSDEGYGPIPSKWKGTCPTDDTNFQCNRKLIGGRYFYKGYEAEGGILNNTSRSLRDYEGHGTHTLSTAAGNFVPGANIFGHGNGTAKGGAPKARVAAYKVCWPSLPSGECFDADTLAAFEAAVADGVDVISASIGGGDQDFLDDPLAIAAFHAVQQGVVVVCSAGNTGPFPGTVSNVAPWEITVAASTNGRDFVSYVALGNNISLKGTSLSSVGASTGQFYPLIGSGDARFSNVSDYDAQFCGEGTLDPNKVKGKILICLTGELAGVDKGYHAAQAGAVGMIVANDIENGDKINPELHFLPASDITYSDAELLYQYMNSTKTPVAQIMNVTIDVGLKPAPVIAPFSSRGPNPLEKSILKPDITAPGVNILASYPTGRAPTASLYDQRRIPFNILAGTSMACPHISGIVALLKFIHPDWSPAAIKSALMTTAKTSDNNLQSILNSTKLEETPFAYGAGHVRPNDAMDPGLVYDASVDDYLNFLCARGYNASEIKRFYEKPFVCAKSFEVTDLNYPSISIPNLNVSARVTINRRVKNVGSSGTYMARVEVPPGVVVSVEPTMLHFRSVGEEKAFKVIFQNTGNVEHEGYMFGTLIWTDGKHFVRSPIAMNLGR | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 39505463 | 39515155 | - | Maker00016041 | Lcy6g1885 | 636329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g1885 | 728 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 15 | 71 | IPR037045 | - | |
Lcy6g1885 | 728 | CDD | PA_subtilisin_like | 313 | 444 | - | - | |
Lcy6g1885 | 728 | SUPERFAMILY | PA domain | 358 | 440 | IPR046450 | - | |
Lcy6g1885 | 728 | Pfam | PA domain | 358 | 430 | IPR003137 | - | |
Lcy6g1885 | 728 | CDD | Peptidases_S8_3 | 69 | 548 | IPR034197 | - | |
Lcy6g1885 | 728 | SUPERFAMILY | Subtilisin-like | 71 | 586 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy6g1885 | 728 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 513 | 523 | IPR023828 | - | |
Lcy6g1885 | 728 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 75 | 582 | - | - | |
Lcy6g1885 | 728 | FunFam | Subtilisin-like protease SBT1.5 | 599 | 726 | - | - | |
Lcy6g1885 | 728 | Gene3D | - | 599 | 726 | - | - | |
Lcy6g1885 | 728 | Gene3D | - | 307 | 451 | - | - | |
Lcy6g1885 | 728 | FunFam | Subtilisin-like protease SBT1.5 | 101 | 330 | - | - | |
Lcy6g1885 | 728 | Pfam | Fibronectin type-III domain | 627 | 723 | IPR041469 | - | |
Lcy6g1885 | 728 | Pfam | Peptidase inhibitor I9 | 24 | 70 | IPR010259 | - | |
Lcy6g1885 | 728 | Gene3D | Peptidase S8/S53 domain | 101 | 595 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy6g1885 | 728 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 27 | 722 | IPR045051 | - | |
Lcy6g1885 | 728 | PRINTS | Subtilisin serine protease family (S8) signature | 512 | 528 | IPR015500 | - | |
Lcy6g1885 | 728 | PRINTS | Subtilisin serine protease family (S8) signature | 173 | 186 | IPR015500 | - | |
Lcy6g1885 | 728 | PRINTS | Subtilisin serine protease family (S8) signature | 99 | 118 | IPR015500 | - | |
Lcy6g1885 | 728 | Pfam | Subtilase family | 99 | 557 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy6g1885 | 728 | FunFam | subtilisin-like protease SBT1.5 | 307 | 450 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g1885 | Lcy-Chr6:39505463 | Lcy6g1892 | Lcy-Chr6:39553274 | 0 | dispersed | |
Lcy6g1881 | Lcy-Chr6:39452459 | Lcy6g1885 | Lcy-Chr6:39505463 | 0 | proximal |
Pathway information
