Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g2115 ATGAAGAAAGAAACAATGGAAGATTTTGCAATAATGGGTGGGTTGGTGGGAGTGCAGTTTGTTTATGCAGGGAACTCTGTTTTTATGAGTTTTCTAATGTCTTTGGGGATTGATCCTTTAACTCTTGTCATCTTCTCAACCTTCTCAACTTTTCTCATTGTCTCTCCCATTGCTGTTTATTTTGAAAGGTCTAATTGGCCAAAGAAACTTAGTTTAAAGTTGATTTCTCAGCTTTTGCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTATTCTTGAAAGGAATACAGCTAACTTCGCCGACGTTAGCGACGGCGATGCCGAATCTCGCCCCGGGAATGATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCGGCTAAGTTGCATATATAGCAAGATCAAGATTTTAGGAACATTTCTATGTGTGATAGGCGCGTTCACGATGAGCGTAATGCACGGCGCTGCAAAAGATAATATCACGCAGCGATCGCCTGCGACCGAGCATATGTTCAATGAACAGAAGATCCTCGGTTGCTTGTATCTGTTCTCGGCGATCATCGTTTTGTCGAGCATAGTTGTTCTACAGGCATCGACGCTAGGCGATTTCCCGGCACCGATGTCGTTGTGCGCGATAACGTCACTGATTGGAGTGATCTTAACCATAGTTGTACAGATAGTTCAAAATCAGAAACTGGAAATTGGTTGGCCACTTCTTAGTGTTAAAGAATTGGCTGCCTATTGTATTCTAGTAAGCAGCCTTCAATTCTGTGCTATTTTGAGATCATTCTTTGTACATATTGTGTGCATATTGATGTATGCTTTTACAAATCTTGCTGACGAGAAGGGCGGAACCATTAGCGGGGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCGGTTCTCGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCCGTTTTCACCTGGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGGCTCTACTTCGTGCTGTGGGCGAAAGGGAAGGAACGTTACGACAACCGAAACGGCCCCGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1134 44.62 MKKETMEDFAIMGGLVGVQFVYAGNSVFMSFLMSLGIDPLTLVIFSTFSTFLIVSPIAVYFERSNWPKKLSLKLISQLLLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGMIFAIAWIFRLEKVRLSCIYSKIKILGTFLCVIGAFTMSVMHGAAKDNITQRSPATEHMFNEQKILGCLYLFSAIIVLSSIVVLQASTLGDFPAPMSLCAITSLIGVILTIVVQIVQNQKLEIGWPLLSVKELAAYCILVSSLQFCAILRSFFVHIVCILMYAFTNLADEKGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTWGESINIGSLAGMFLMFTGLYFVLWAKGKERYDNRNGPESEFDVDKPLLS 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44818448 44821125 - Maker00016000 Lcy6g2115 636559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g2115 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 286 356 - -
Lcy6g2115 377 PANTHER WAT1-RELATED PROTEIN 16 361 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy6g2115 377 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1833 Lcy-Chr12:39447035 Lcy6g2115 Lcy-Chr6:44818448 1.74E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g2115 - - - 0.0