Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy6g2141 | ATGGACTCACCTAGACCTGCCACGGAAAGCATGCACCAAGGATTTATTGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGCAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGAAGGAGAAAATATTGTCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGGGTTGCGTCCAGCTCAAATATTCCAGGTGTCTCGATGGCTATCAATCAATCTTCTATGGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAGCGACAGTTTTATCACTCACACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGTGAGGATGAAGTAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTCGATGATTTTGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGTTGGTGCTAGCTGATGGTCATGTTCCTTGGGCGTGTGAAGCATTCTCAAAACTTCACGGGAAAGAGCTTGTCATATCTCCGGCTCTCTTTTGCCATTTTGAAAGTTTGATAAGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGCCTTCTTGATGCCTCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGATGAGAGTTTGGATTCGACGAAAAACTGCAGAAGAGATGTCGATTAG | 801 | 42.95 | MDSPRPATESMHQGFIGHNADGVSCEKEGSHSFPIETYLQNAQQEGENIVPECPSSMECIERVASSSNIPGVSMAINQSSMGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRLVLADGHVPWACEAFSKLHGKELVISPALFCHFESLIRCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKDESLDSTKNCRRDVD | 266 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 45282938 | 45295934 | - | Maker00021137 | Lcy6g2141 | 636585 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy6g2141 | 266 | CDD | VEFS-box_EMF2-like | 115 | 249 | - | - | |
| Lcy6g2141 | 266 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Lcy6g2141 | 266 | PANTHER | POLYCOMB GROUP PROTEIN | 54 | 262 | - | GO:0005634(PANTHER)|GO:0031490(PANTHER) | |
| Lcy6g2141 | 266 | Pfam | VEFS-Box of polycomb protein | 107 | 244 | IPR019135 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy6g0314 | Lcy-Chr6:2952162 | Lcy6g2141 | Lcy-Chr6:45282938 | 1.46E-62 | dispersed |
Pathway information