Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g2209 ATGGAAGAAAGTAGAAATCATCATCTTTCTGAACAAAGTACAAAGGGGTTTGCTAAAAGCACCAAGGATCAGAAACTTAATGTGTATGTGTGGGACATGGATGAGACTATCATCCTGCTCAAGTCCTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATGTTAAAAGGGGTGAAGAACTTGGAAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAGAACTATAATCAGCCCTTTCTTGATGCATTGAGTGAATATGATGATGGCCGTGATCTTTCTAATTATGATTTTGACCAAGATGGTTTTGGTCCACCATATGATGATGGAAACAAAAGAAAACTGGCTTTTAGGCAACGTGCTATAGCCATTAAGTACAGAGAGGGCCTGCAGAAGATCTTTGATGAACAGAAGATGAAGCTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGAGAGATGGTTCTCCTCAGCACGAGCTTTCTTGGAGGAGTGTTCGTTTTCAGATAAACCACCACTTGCCTCTGCTGATCGGACATCAAACACTACTTCTAGAAGTTCCCAGCATGTTAATGTCTTGGTGACTTCTGGATCATTGATACCCAGCCTCGTGAAATGCTTACTATTTCGGCTCGATAATTTGATAACACCTGGAAATGTCTACAGTTCGTGGGAAGTGGGAAAACTTCAATGTTTCCAGTGGATCAAGGAGCGTTTTAACAAGTCAAATGTTCGTTTCTGCGTAATAGGCGATGGATGGGAAGAGTGCGAAGCTGCACAGTCCATGAAATGGCCATTTGTTAAGATTGATCTGCAACCTGGAAGTCCTCACAGGTTTCCTGGTCTGTCTTTGAAAACACTAGGCTTTTACTTCTCTGTTATTTATGGTAACTCCGATTCATCAAGTGATGAAGAATAG 960 40.83 MEESRNHHLSEQSTKGFAKSTKDQKLNVYVWDMDETIILLKSLLNGTYAEAFCGSKDVKRGEELGKIWEKQILDLCDHHFFYEQIENYNQPFLDALSEYDDGRDLSNYDFDQDGFGPPYDDGNKRKLAFRQRAIAIKYREGLQKIFDEQKMKLWEELYEMTDVYTERWFSSARAFLEECSFSDKPPLASADRTSNTTSRSSQHVNVLVTSGSLIPSLVKCLLFRLDNLITPGNVYSSWEVGKLQCFQWIKERFNKSNVRFCVIGDGWEECEAAQSMKWPFVKIDLQPGSPHRFPGLSLKTLGFYFSVIYGNSDSSSDEE 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46388657 46392695 + Maker00021321 Lcy6g2209 636653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g2209 319 SUPERFAMILY HAD-like 27 285 IPR036412 -
Lcy6g2209 319 PANTHER EYES ABSENT 11 307 IPR028472 GO:0004725(InterPro)|GO:0004725(PANTHER)|GO:0005634(PANTHER)|GO:0030154(PANTHER)|GO:0045739(PANTHER)|GO:0048856(PANTHER)
Lcy6g2209 319 FunFam Eyes absent homolog 27 293 - -
Lcy6g2209 319 Gene3D - 27 289 IPR038102 -
Lcy6g2209 319 NCBIfam EYA conserved domain 26 301 IPR006545 GO:0007275(InterPro)
Lcy6g2209 319 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 26 284 - -
Lcy6g2209 319 SFLD Haloacid Dehalogenase 26 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g2209 K15616 - csv:101203755 561.607