Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy6g2318 | ATGGGGAAGAACGAATTTCTAACCCCTAAAGCGATTGCAAACAGAATCAAGGCGAAAGGGCTCCAGAAGCTCAGATGGTATTGCCAGATGTGTCAAAAGCAGTGTCGGGATGAGAATGGCTTCAAATGCCACTGTATGAGTGAAAGCCACCAGCGCCAAATGCAGATCTTTGGCCAAAATCCACATCGTATTGTCGAAGGTTACTCCGAAGAGTTTGAGAGATCTTTTATGGAGCACATTAAGCGTAGCCATCGGTTCAGTCGCGTGGCAGCTACAGTGGTCTACAATGAATACATTAACGACAGGCATCATATTCATATGAATTCAACGCAGTGGGCTACTCTCACTGAGTTTGTGAAACATTTGGGTCGAACTGGGCAGTGTAAAGTAGAGGAGACTCCCAAGGGTTGGTTCATTACTTACATAGATAGAGATTCAGAGACGCTTTTTAAAGAGAGAATGAAAAATAAGAGGATGAGGGCAGATTTAGCTGAAGAAGAGAAGCAAGAGAGAGAGATAAAGAGGCAAATTGAGAGGGCTGAGCAATTAGCGCCTTTGGCTTCTGTATCTGCTGAGCCTTTGGAGGCTGAACAAACGAGAGAGTTGAAATTGGAGAGTGGGGTTAAGCTAGGATTTGCTTTGGGAACAACATCAAAATTGAAGGAGAAAGGAGAGAGTTCCAGGGTGGTTTTTGATGAGGATGAGACAGATGAGACTGCCAGGGGGAAACCTGGAGATTCCAAAAACAAGATGGGTAGTGGTGGTTTGTCAGCTTTGGAGGCGTTGATGAGAGAAGAAGAGATGAAGAAGGAGAAGATTAATAGGAAGGATTACTGGCTGTGTGAGGGAATAATTGTAAAGGTCATGAGTAAGAATTTGGCTGAGAAGGGATACTATAAACAGAAGGGAGTTGTACGAAAAGTGATTGATAAATATGTTGGAGAGATTGAAATGCTCGATGGCAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCACAAATTGGTGGCTTAGTAAGGATAGTAAATGGGGCATATCGTGGATCAAATGCTAGGTTGTTGGGCGTTGACACTGATAAGTTTTGTGCTAAAGTGCAAATAGAAAAGGGTGTGTACGATGGCAGGGTGCTTAAGGCTGTTGAATATGAAGATATCTGTAAACTTGCATCATAA | 1185 | 42.87 | MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFERSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRMRADLAEEEKQEREIKRQIERAEQLAPLASVSAEPLEAEQTRELKLESGVKLGFALGTTSKLKEKGESSRVVFDEDETDETARGKPGDSKNKMGSGGLSALEALMREEEMKKEKINRKDYWLCEGIIVKVMSKNLAEKGYYKQKGVVRKVIDKYVGEIEMLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLAS | 394 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 47970226 | 47971410 | - | Maker00021402 | Lcy6g2318 | 636762 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy6g2318 | 394 | FunFam | DNA/RNA-binding protein KIN17, putative | 337 | 393 | - | - | |
Lcy6g2318 | 394 | MobiDBLite | consensus disorder prediction | 225 | 254 | - | - | |
Lcy6g2318 | 394 | Gene3D | - | 283 | 336 | - | - | |
Lcy6g2318 | 394 | Gene3D | - | 337 | 393 | IPR014722 | - | |
Lcy6g2318 | 394 | Gene3D | - | 60 | 160 | IPR038254 | - | |
Lcy6g2318 | 394 | SUPERFAMILY | beta-beta-alpha zinc fingers | 26 | 66 | IPR036236 | - | |
Lcy6g2318 | 394 | SMART | Kin17_mid_2 | 52 | 178 | IPR019447 | - | |
Lcy6g2318 | 394 | Pfam | KN17 SH3-like C-terminal domain | 275 | 328 | IPR041330 | - | |
Lcy6g2318 | 394 | CDD | KOW_KIN17 | 339 | 392 | IPR041995 | - | |
Lcy6g2318 | 394 | Pfam | Domain of Kin17 curved DNA-binding protein | 52 | 177 | IPR019447 | - | |
Lcy6g2318 | 394 | Coils | Coil | 154 | 183 | - | - | |
Lcy6g2318 | 394 | Coils | Coil | 256 | 276 | - | - | |
Lcy6g2318 | 394 | FunFam | DNA/RNA-binding protein kin17-like | 283 | 336 | - | - | |
Lcy6g2318 | 394 | PANTHER | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG | 1 | 393 | IPR037321 | GO:0003690(PANTHER)|GO:0005634(PANTHER)|GO:0006260(PANTHER)|GO:0006974(PANTHER) | |
Lcy6g2318 | 394 | MobiDBLite | consensus disorder prediction | 225 | 245 | - | - | |
Lcy6g2318 | 394 | FunFam | DNA/RNA-binding protein KIN17, putative | 61 | 160 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy6g2318 | K13102 | - | csv:101216499 | 738.413 |