Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy6g2364 ATGGCCGATAATCTGTTTGCTGCTCACACTGCTGCTCTTTTCCAGCTTACGCTCTACTTCCTCTACTTCCAACCACTTATGATGTCTGTTTTTGGTCTCTGCCTCTGCCTTCTGTTTGGTGGCGCCGCCCTCGTTGCCGCCGCGGGCGGTGGCGGCGGCCAATCCAGGAACCTTGATAGCACACCCACATGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTCATTTCCATTGTATTGGAAAAGGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAGGCATAAAAGTTCTCTTTATGAAGCTCTGGAGAAGGTTAAGGCTGAATTGATGATTTTGGGTTTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATCTGCATTCCTCCGGCCATTGCAAACACCATGTTGCCTTGTCCCCTTGAAGAGAAAGATGCCTCATCATCTGAAGCCGGTGAAGACGAACATCACCGAAGACTTCAATGGCTAATCCGAAGATCGTTGGCCGGAGGCCACAATGTCGTCTCGTGTAAGGATGTAAGAGCTTGTCCCATGAATCTTACCCTTGATTTTATAATCTTGATTGATGCTAAGCAGAGGAAGGCTTCTAACAATGCTCATTCTTCCAAACAGGGTAAAGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATATTCTTCTTAGCTGTGTTTCATGTGGTCTTTAGTGTTACCACAATGACACTTGGAAGGGTAAAGATTCGAGGATGGAAGGAGTGGGAGCGGGAAACTTCAACCCATAACTATGAGTTTTTCAATGATCCTGCAAGATTTAGGCTTACCCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTCTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAACGGATTCATAACAGTTCATTTAGCACCGGGAAGTAAATTTAACTTTCAAAGATATATCAAGAGGTCATTAGAAGACGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATGTAGCTGGATGGAAGACATTGTTTTGGGCATCATTTATCCCTCTGATTATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTCTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCTCTCGTGCAAGGATCCGACAGATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCATTCCAGACCACCTTTATTTTGGCTACACTGCATTCTTTTGGGCCGAATTCTTGCTTCTCAGACGGTCCCATGCTTACCATCATAAAAGTTTGTATAGGGGTTGCGGCATTATTTCTATGCAGCTACGTTACGCTTCCGTTATACGCCCTTGTAACTCAGATGGGTTCGGGCATGAAGAAGTCCATCTTTGACGAACAGACATCAAAGGCACTCAAGAAATGGCGTGAAACAGCCAAGAAGAAGCGGGTTCAACAAGCCTCAGCTACTAAAACACTTGGAGGTAGTTCAAATGCCTCACCTCTACGCTCCTTTGGACGCTCACTGCGACGGTTCAAAACTACAGGACACTCCATACGTGTGCCTGCATATGAGGACCTTGAGTCGTCCGATCATGAGGCCGATCCGTTAGCAATGCCTGCACAAGTATCAGCTACCGAATTGATTAATGTCGATGTGGACGGAGATGAAATACACGAAATTGCCGAAACAGATCAACCCCAGAGTATAGAGCAAACTAAAGAGGAAGGAGATGAGTTCTCATTCATAAAGCCTGCAGCAGTGAAATGA 1914 44.41 MADNLFAAHTAALFQLTLYFLYFQPLMMSVFGLCLCLLFGGAALVAAAGGGGGQSRNLDSTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTERHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANTMLPCPLEEKDASSSEAGEDEHHRRLQWLIRRSLAGGHNVVSCKDVRACPMNLTLDFIILIDAKQRKASNNAHSSKQGKVSLISIDGLHQLHILIFFLAVFHVVFSVTTMTLGRVKIRGWKEWERETSTHNYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNVAGWKTLFWASFIPLIIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDRYFWFGRPQLILHLMHFALFQNAFQTTFILATLHSFGPNSCFSDGPMLTIIKVCIGVAALFLCSYVTLPLYALVTQMGSGMKKSIFDEQTSKALKKWRETAKKKRVQQASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDHEADPLAMPAQVSATELINVDVDGDEIHEIAETDQPQSIEQTKEEGDEFSFIKPAAVK 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 48434105 48439222 + Maker00021290 Lcy6g2364 636808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy6g2364 637 PANTHER MLO-LIKE PROTEIN 1 50 566 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy6g2364 637 MobiDBLite consensus disorder prediction 609 630 - -
Lcy6g2364 637 MobiDBLite consensus disorder prediction 609 637 - -
Lcy6g2364 637 Pfam Mlo family 56 548 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2270 Lcy-Chr13:41607802 Lcy6g2364 Lcy-Chr6:48434105 6.28E-193 dispersed
Lcy1g0308 Lcy-Chr1:2735669 Lcy6g2364 Lcy-Chr6:48434105 1.74E-49 dispersed
Lcy6g2364 Lcy-Chr6:48434105 Lcy7g0665 Lcy-Chr7:6142794 4.66E-97 dispersed
Lcy9g1288 Lcy-Chr9:37572574 Lcy6g2364 Lcy-Chr6:48434105 8.37E-57 transposed
Lcy10g1948 Lcy-Chr10:43531013 Lcy6g2364 Lcy-Chr6:48434105 2.90E-83 transposed
Lcy1g0545 Lcy-Chr1:4704078 Lcy6g2364 Lcy-Chr6:48434105 3.09E-220 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy6g2364 K08472 - csv:116402632 941.028