Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0042 ATGTTGGGCGCCGCCGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGAATTTTGAACACTCCGTCATGGTACTCCGCCGGAGAATTGGAATACTTCACCGACACCACCACCCTCTTCATCGTCGAACTCATCTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACCGGAACCGACGTCGGGTACCCGGGCGGGCTGTGGTTCGACCCGCTCGGGTGGGGCAGCGGGTCACCTGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGACTGGCCATGTTGGCCGTGATGGGCGCGTGGTTCCAACACATCTACACCGGCACCGGCCCCATCGACAATCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACTGTCTTCGCCCATCAAATAGTGACAGAGCGGAGGAGAAATCGGGCATCAGGAGGAAGAGGGAGGATAGTTGGTTCGGCGGACGGAGATTTGAGCCGGAATGGGGCGGCCGGTGCCGGAGCCGCCGCAGCTGCTGCAGAACATACGGCCAGAGCCGGAACAGGTCCGGCAGCCGATGTCGCCGTCGGACCAGCGGGAGCAGAGGCAGGGGACTCGGCCGGTGCCGTTGCAGGAGGGGCAGCGGGGGAAGGAGCCGGCCATGGGCTTTTGGTCCATGACGGATTTGACGAGAACGGCGCCGGCGAGGACGCTGAGGCCGGTGGCGAGCTGGGTGAGGACGATCGGAACCATGGCTGA 798 61.78 MLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAHQIVTERRRNRASGGRGRIVGSADGDLSRNGAAGAGAAAAAAEHTARAGTGPAADVAVGPAGAEAGDSAGAVAGGAAGEGAGHGLLVHDGFDENGAGEDAEAGGELGEDDRNHG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 331102 334641 - Maker00025983 Lcy7g0042 636874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0042 265 MobiDBLite consensus disorder prediction 158 178 - -
Lcy7g0042 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 153 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Lcy7g0042 265 Gene3D Chlorophyll a/b binding protein domain 1 146 - -
Lcy7g0042 265 SUPERFAMILY Chlorophyll a-b binding protein 1 152 - -
Lcy7g0042 265 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
Lcy7g0042 265 MobiDBLite consensus disorder prediction 222 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0986 Lcy-Chr2:9184473 Lcy7g0042 Lcy-Chr7:331102 2.41E-65 dispersed
Lcy7g0042 Lcy-Chr7:331102 Lcy9g2374 Lcy-Chr9:48038279 1.17E-18 dispersed
Lcy7g0042 Lcy-Chr7:331102 Lcy9g0400 Lcy-Chr9:11290025 6.03E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0042 K08908 - csv:101214055 321.242