Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0047 | ATGAAGCTCCTTATTCTCGCCACCCTCACCATCTCACTCCTCTTCCCTTTCAGCCTCCTCAACTTCCTCTTTTGCTCTCTCCTCGCCCTCTCCCTCAACTTCTGGCTAATCCCTGGCGGCTTTGCATGGCGCAACCACCACCACTCCTCCACCAACCTCCCTGGCCCCTCTGGCTGGCCACTCCTCGGAACACTCCCTCAAATGGGGCCGCTCGCTCATCGGAATCTTGCTGCCATTGCTCACTCCTTCAAAGCCACGCGCCTCATGTCCTTCAGCTTGGGTGCCAACCGAGCCATCATAAGCAGCCACCCCGATACGGCCAAGCAGATTCTCTGTGGCTCGGCTTTCTCCGACCGGCCAGTCAAGCAATCGGCTCGGCTCATGATGTTCGAGCGAGCCATTGGCTTTGCTCCCAACGGGGTCTATTGGCGCAATCTTCGGCGAATTGCTGCAAACCACATGTTTTCTCCACGGAGAATCTCTGACCTGGAGGGGCTCCGAAGGGAGGTGGCGAGAGAAATGACGGGGGAGGTGTCGGGGAATATGGTGACGGAGGGGGTGGTGAGGCTGAGAGAGGTGCTGCAGAAGCATTCGTTGAAGAACATAATAGAAAGTGTGTTTGGAAGTGGTTTGGGAATGGGAAGGAAGGAGGAGCTGAGTGATATGGTGAGAGAAGGGTATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCAGTGAGCTTTTTGGATTTTGGTGGAGTGAGGAGGAAGTGCCATGAATTGGCGAGGAAGGTTAATGTGGTAGTTGGTCAGATTGTTGAAGAGAGAAAAAGAGAAAAGAATGAGTTCAATAATGACTTTCTTAGTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTAAATGATTCAGATATGGTGGCTGTTTTATGGGAAATGATATTTCGTGGAACCGATACCATAGCAATACTTGTAGAATGGATCATGGCTAGAATGATACTACACCCAGAGATCCAAGCCAAAGCTCAAAACGAGATCGACACGTGCGTAGGGAGCAACAGGCACGTGCGAGATTCCGACATTCCCAATCTTCCTTACCTCCAAGCCATAGTGAAGGAAGTTCTTCGTCTACACCCTCCAGGCCCATTGCTCTCGTGGGCCCGTTTGGCGATCCACGATGTCCACGTGGACAAGATCTTAATCCCAGCTGGCACCACGGCAATGGTCAACATGTGGGCCATAGCCCACGACCCTTCGATATGGAAAGACCCGTGGACATTTCGGCCCGAGCGGTTCATAGAAGACGACATGTCGATCATGGGCTCGGACCTGAGACTGGCGCCGTTCGGGGCTGGGCGAAGGGCGTGCCCGGGAAGGGCCTTGGGTTTAGCCACTGTGCACCTATGGCTAGCCACTTTTCTCCAACAGTTCAAATGGCTTCCATGTTCGACAAAGTCGGTTAATTTGTCGGAATGTTTGAAGCTATCCCTTGAAATGAAGAAACCTTTGGATTGTCGTGTGGTTAGTCGGTGA | 1515 | 51.82 | MKLLILATLTISLLFPFSLLNFLFCSLLALSLNFWLIPGGFAWRNHHHSSTNLPGPSGWPLLGTLPQMGPLAHRNLAAIAHSFKATRLMSFSLGANRAIISSHPDTAKQILCGSAFSDRPVKQSARLMMFERAIGFAPNGVYWRNLRRIAANHMFSPRRISDLEGLRREVAREMTGEVSGNMVTEGVVRLREVLQKHSLKNIIESVFGSGLGMGRKEELSDMVREGYELIAMFNWEDYFPVSFLDFGGVRRKCHELARKVNVVVGQIVEERKREKNEFNNDFLSTLLTLPKEDQLNDSDMVAVLWEMIFRGTDTIAILVEWIMARMILHPEIQAKAQNEIDTCVGSNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFRPERFIEDDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQQFKWLPCSTKSVNLSECLKLSLEMKKPLDCRVVSR | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 363829 | 368065 | - | Maker00026149 | Lcy7g0047 | 636879 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0047 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0047 | 504 | SUPERFAMILY | Cytochrome P450 | 54 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PANTHER | CYTOCHROME P450 78A7-RELATED | 17 | 500 | IPR051996 | - | |
| Lcy7g0047 | 504 | FunFam | Cytochrome P450 78A5 | 45 | 504 | - | - | |
| Lcy7g0047 | 504 | Pfam | Cytochrome P450 | 54 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0047 | 504 | Gene3D | Cytochrome P450 | 42 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy5g2475 | Lcy-Chr5:47499117 | Lcy7g0047 | Lcy-Chr7:363829 | 2.15E-183 | dispersed | |
| Lcy7g0047 | Lcy-Chr7:363829 | Lcy8g0278 | Lcy-Chr8:8225270 | 1.51E-158 | dispersed | |
| Lcy7g0047 | Lcy-Chr7:363829 | Lcy13g1642 | Lcy-Chr13:35382841 | 6.24E-190 | transposed |
Pathway information