Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0076 ATGTTTTCTTCTTCTTCGCAGATATTTGGATTGGAATCTTCTGCTCATATGATTTCTTCTATCTTGGATTTGATTTCTTCAAATGGATTTCAGATTCTGTTACGATTTGTTCTTGCCATGGAAGAAGAGATCGGAGAAGAGTTCAAGAGGAGTGGTTTCACCTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTCTTTCGTTTTGTGTTAATTACAATCTAAAGCCTACGGATATAGTTTCTAGCTGGGAAGTCTACTATCTCAACAGGCAATTAGATGGGTCAATGGTACAAATTGAACAGATGGATGGATTTTTACAACATTTACAGAATGAGCAAGAAGAAGCGGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTGAACATGTATGGATTCTTTTCGATGATTTTGAACAATGAGGATGAAGATCCAAAGGAAGACATTCTTAAAACTCCAAATGGAAAATCTCAGAGCCTCCACAAGGATCGATTTGATTTGACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGAAAGCCTTCAAAGCATATGACACCCTTTGGGCAAAGAACAGAAAAATTTGTTGTGAGGTTCAGCATTAATAGTGTGCCTGATAAGGAGACTGCTGAAAAGGAAGATAATTGCGAGAATGACGAGGATGCAATCATCAAGAAGGTTCGACCGCTGCAAGGGTGCTCCTTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAGGGTTGAAGATAGGTTTAATTCTCTTGATAACCGAATCATGAAGCATGCTGAAGCTTTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGATCCTACAGTTGCTTCACAGAAAAGCATGTTTGCAGTGGGCATGATTTGGTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTGTTGAGCATTCGGGGGGGCAGCAAGTTCGTCTAGAATTACAAAACTTAAGCCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGTCACTGCTTGGTTGCATCCAAACTTATAGATTCTTTTCCTGTATCTTCCACTGTTGACCCCATTCTGCCTCCTGCAAAGAAGATAGCTTTGAACCATGATATCCAGCCAATTAATCAATTTTCTACACAGTCAGAATTATCAATGGTGTGTGTTCTTATTATTGCGTCAGGCCCCTATACTACAGCAGACAACTTATTGTTTGAGCCTTTGACAGAGTTACTAGCATATGCAAAAAGGAAGCTTCCTCAGCTATTAATATTGCTTGGGCCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTACAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGCCCTGATGCACGTGTACTGTTGATGCCATCTATAAGGGATGCTAATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCTCAAACCCAGGCATCTTGGAAGCAAATCAGGGTATCCTGCCACCTGCACCTGCACTTACCAAAAAGTATTCTGATATTTCCGTTGATAATGGATTTCAGGCAAAGATTGCCTGCTGTACCGTGGATATTCTCAGACATCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACAAAGGGATCAGCCAACGACCGCCTGAGCACACTTGCAACCGAAGGAGTTCCACTGGACTTTTCACTTGCCCCAAAAGCTCTCGACATCTCTGTAATACCCGATATTCTCATCCTTCCATCCGACATGAAACCCTTCGTGAAGGTTATTTCCCTTGGTGAAGGAGGCCCGGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCAGGAAGACTGGCCAAAGGTGAAAGAGGAGGTACTTTTGTAGAACTTAATTACTTTGGTAGGCCTGACCAGATAAATGCTGCAGTTGTCAGCATATGA 2040 42.16 MFSSSSQIFGLESSAHMISSILDLISSNGFQILLRFVLAMEEEIGEEFKRSGFTFDEEEEILKKCLSFCVNYNLKPTDIVSSWEVYYLNRQLDGSMVQIEQMDGFLQHLQNEQEEAVIKGEPDLHVYSSKDVNMYGFFSMILNNEDEDPKEDILKTPNGKSQSLHKDRFDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFSINSVPDKETAEKEDNCENDEDAIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNSLDNRIMKHAEAFAASGLYEEAVDPTVASQKSMFAVGMIWCDGEGHLNDKSTLLQSSVEHSGGQQVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLVASKLIDSFPVSSTVDPILPPAKKIALNHDIQPINQFSTQSELSMVCVLIIASGPYTTADNLLFEPLTELLAYAKRKLPQLLILLGPFVDSEHSDIKRGTVQMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLSNPGILEANQGILPPAPALTKKYSDISVDNGFQAKIACCTVDILRHLSGEELSRNLTKGSANDRLSTLATEGVPLDFSLAPKALDISVIPDILILPSDMKPFVKVISLGEGGPEEERASCVCVNPGRLAKGERGGTFVELNYFGRPDQINAAVVSI 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 723183 730969 - Maker00026015 Lcy7g0076 636908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0076 679 FunFam DNA polymerase alpha subunit B 39 114 - -
Lcy7g0076 679 Pfam DNA polymerase alpha subunit B, OB domain 284 367 IPR054300 -
Lcy7g0076 679 Pfam DNA polymerase alpha/epsilon subunit B 410 532 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Lcy7g0076 679 Gene3D - 39 116 IPR043034 -
Lcy7g0076 679 Pfam DNA polymerase alpha subunit B N-terminal 42 91 IPR013627 -
Lcy7g0076 679 PIRSF DNA_pol_alpha_2 547 671 IPR016722 -
Lcy7g0076 679 PIRSF DNA_pol_alpha_2 38 536 IPR016722 -
Lcy7g0076 679 Gene3D - 388 675 - -
Lcy7g0076 679 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 557 665 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0076 K02321 - csv:101206268 1057.74