Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0086 ATGCAAGTCACTGATAAAATCAGTGCGTTTTGTTTGTTCATTCTCTTTGTTCTTCAAATGGGGTTTCCTCGTTTTTTGGTTTTGATTCTTCTCGTCGTTTCTTCTGTCGATTGTCAGGTTAAAGAGTTCGTCAGTATAGACTGTGGTGGCGCGAAGAACTACACCGACCCAGTTACAGGGCTGGGATGGATTTCCGACGCCGGAATCATGGCCGCCGGCGGGTCGTCGCCGGTGGAAAACCCAAATGGGAACTTGATGCAGTACCAAACGCGGCGGGATTTCCCAATCGATGACAAGAAGTACTGTTACACTTTGAACACAGAGGAAAGAAGGAGATATTTGGTTAGAGCAACTTTTCAGTATGGGAGTTTGAAAAATGAAGAGACTTACCCTAAGTTTCAGCTTTATTTGGATGCAACTAAGTGGTCGACTGTTACGATTTTTGATGCTTCGAGAGTTTATGTGAAGGAGATGATCATCAGAGCACCTTCAAATTCGTTTGATGTTTGCATATGCTGTGCAACTACTGGTTCTCCATTTATATCCACTCTTGAGCTTCGCCCTTTTAATCTTTCTATGTATGCAACTGATTTTGAAGATAATTTCTTCTTGGAAGTGGCTGCTAGAGTGAATTTTGGGGCTCTCACCAAGGATGTGATAAGGTACCCAGATGATCCATATGACAGAATTTGGGATTCAGACCTTGAGAAGAGGCAAAATTATCTTGTGGGGGTGGCTCCTGGGACAGAAAGAATCAGTACTTTGAACAACATTAATGTAATGACAAGAGAATATCCGCCTGTTAAGGTGATGCAAACTGCAGTTCTTGGCACAAAAGGAGTGCTCAGCTACAGATTGAATTTGGATGATTTTCCTGCCAATGCCAGGGCTTATGCATATTTTGCTGAAATTGAAGATTTGGGTTGGAATGAAACTCGGAAGTTCAAATTGGAGGAACCAAACATTCCGGACTCGAGCAATGCAGTAGTGAATATTGCAGAGAATGCCAATGGGACCTATACTCTTTATGAACCAAGTTATATGAATGTGACTCTGAGTTTCGTGCTTTCGTTCTCCTTTGTCAAGACTCGAGATTCAACTCGAGGACCACTTTTGAATGCATTGGAAATTAGCAGATATGTTGAAATTGCTGCCAAGACTGATAGGCGAGATGAGACTGTTGTGAATGCCTTCCGTAACATGTCAGCAGAGAGTGTTTGGACAAATGAAGGCGATCCTTGTGTTCCAACGAGCTGGGAGTGTGAACTTTCCAGAAAGAATGTCGAGGGCGAAATTCCACCCGAGATCAATTCTATGGATGGGTTAACAGAATTGTGGTTAGATGGTAATTCCCTTGCAGGACCACTGCCTGACATGAGTAATCTAATAAACTTGAAGATTTTACATCTAGAGAATAACAAATTGACAGGGACATTACCTTCTTACCTGGGTAGTTTGCCCAACTTACAGGAACTATATATTCAAAACAATTCGTTTTCGGGTGAAATACCTTCAGAATTACTGGCAAAGAAACTCATCTTTAAGTACGACGGTAACTTGGGGCTGCACAAGAGTAAACAATACAATATGCATTCTAAGCTTGTAATAGGAGTTTCATTGGGAGTCCTTGTGCTTCTGATCATTCTACTTTTAGGGAGTTTGCTGTTACTCCGCAAGGTTCGAAGAAGAACGACGCCTTACCAGAAAAAAGGTCTCTACTCGAGAAACCTGCTTAATACTTCTAGTTCTCTTATAGCACCCCGTTTTTGCAAATTATCTCATGTCTTGTGGACCTTAGGCGGTTCTCTGCAAACCAGCACCAAGCGCTCTTCTGGATACTCCATCGGCAAGGGGGACGAAGGCGTTGCCTACTATTTATCTCTCTCTGAGCTGGAAGAAGCAACGAATAACTTTTCTAAGAAAATTGGTAAAGGCAGCTTTGGTTCAGTCTATTATGGGAAGATGGCAGACGGAAAAGAAGTGGCAGTTAAAATCATGGCTGAGTCATCTGCACATGGGAATCAGCAATTTATGACCGAGGTTGCCCTCTTATCAAGAATTCATCACCGAAACTTGGTTCCTTTGATCGGGTATTGCGAAGAAGAACATCAACGGATTCTGGTTTATGAATATATGCACAATGGAACATTGCGAGATCACTTATATGGTTGTACCAATCAGAAGCACTTAGACTGGCTGGCTCGCCTGCACATTGCAGAAGATGCAGCCAAAGGGCTCGAGTATTTGCATACTGGATGCAGCCCGAGTATCATTCATCGAGACGTAAAAACAAGCAACATCCTCCTAGACATCAATATGAGAGCAAAAGTTTCCGACTTTGGACTCTCGAGGCAAGCCGAGGAGGATTTGACCCATGTATCAAGCGTTGCTCGAGGAACAGTAGGCTACTTGGATCCCGAGTACTATGCCAGTCAACAACTGACCGAAAAGAGCGACGTCTATAGTTTTGGGGTGGTTCTACTTGAACTGATCTCCGGAAAGAGACCTGTCTCACCAGAAGACTATGGCAGTGAATTGAACATCGTTCACTGGGCGAGGTCTCTTGTCCATAAAGGGGACGTGACGAGCATCGTAGATCCATTTCTAGAAGGAAACGTCAAAATTGAATCCGTTTGGAGAATTGCTGAAGTTGCCATACAGTGTGTGCAGCAGCATGGAGTTTCCAGGCCAAGGATGCAGGAAGTCATTGTGGCCATACAAGATGCAATCAAGATTGAACATGGCACTGAAGGAAACCAGAAACTATCTTCAGGCAGTTCAAAAGCACAGTCATCTCGGAAAACTTTGCTGACGACGTTTCTCGAAATCGAGAGCCCCGACGGTTCCCTCCTTCCCTCTGCAAGATAA 2868 43.62 MQVTDKISAFCLFILFVLQMGFPRFLVLILLVVSSVDCQVKEFVSIDCGGAKNYTDPVTGLGWISDAGIMAAGGSSPVENPNGNLMQYQTRRDFPIDDKKYCYTLNTEERRRYLVRATFQYGSLKNEETYPKFQLYLDATKWSTVTIFDASRVYVKEMIIRAPSNSFDVCICCATTGSPFISTLELRPFNLSMYATDFEDNFFLEVAARVNFGALTKDVIRYPDDPYDRIWDSDLEKRQNYLVGVAPGTERISTLNNINVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEDLGWNETRKFKLEEPNIPDSSNAVVNIAENANGTYTLYEPSYMNVTLSFVLSFSFVKTRDSTRGPLLNALEISRYVEIAAKTDRRDETVVNAFRNMSAESVWTNEGDPCVPTSWECELSRKNVEGEIPPEINSMDGLTELWLDGNSLAGPLPDMSNLINLKILHLENNKLTGTLPSYLGSLPNLQELYIQNNSFSGEIPSELLAKKLIFKYDGNLGLHKSKQYNMHSKLVIGVSLGVLVLLIILLLGSLLLLRKVRRRTTPYQKKGLYSRNLLNTSSSLIAPRFCKLSHVLWTLGGSLQTSTKRSSGYSIGKGDEGVAYYLSLSELEEATNNFSKKIGKGSFGSVYYGKMADGKEVAVKIMAESSAHGNQQFMTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDHLYGCTNQKHLDWLARLHIAEDAAKGLEYLHTGCSPSIIHRDVKTSNILLDINMRAKVSDFGLSRQAEEDLTHVSSVARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKRPVSPEDYGSELNIVHWARSLVHKGDVTSIVDPFLEGNVKIESVWRIAEVAIQCVQQHGVSRPRMQEVIVAIQDAIKIEHGTEGNQKLSSGSSKAQSSRKTLLTTFLEIESPDGSLLPSAR 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 813779 820243 + Maker00026123 Lcy7g0086 636918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0086 955 Gene3D Phosphorylase Kinase; domain 1 615 711 - -
Lcy7g0086 955 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 419 510 - -
Lcy7g0086 955 SUPERFAMILY Protein kinase-like (PK-like) 623 904 IPR011009 -
Lcy7g0086 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0086 955 FunFam Leucine-rich repeat receptor-like protein kinase 609 711 - -
Lcy7g0086 955 SUPERFAMILY L domain-like 420 507 - -
Lcy7g0086 955 Pfam Leucine Rich repeats (2 copies) 464 497 IPR025875 -
Lcy7g0086 955 Gene3D Ribonuclease Inhibitor 392 521 IPR032675 -
Lcy7g0086 955 Gene3D Transferase(Phosphotransferase) domain 1 712 929 - -
Lcy7g0086 955 ProSiteProfiles Protein kinase domain profile. 636 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0086 955 PANTHER OS07G0107800 PROTEIN-RELATED 38 914 - -
Lcy7g0086 955 Pfam Protein tyrosine and serine/threonine kinase 638 903 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0086 955 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524(InterPro)
Lcy7g0086 955 SMART serkin_6 636 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0086 955 Pfam Malectin-like domain 46 378 IPR024788 -
Lcy7g0086 955 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 712 919 - -
Lcy7g0086 955 CDD STKc_IRAK 642 903 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1453 Lcy-Chr3:41283630 Lcy7g0086 Lcy-Chr7:813779 2.92E-48 dispersed
Lcy5g0257 Lcy-Chr5:2426376 Lcy7g0086 Lcy-Chr7:813779 2.39E-281 dispersed
Lcy6g0518 Lcy-Chr6:4848472 Lcy7g0086 Lcy-Chr7:813779 5.22E-66 dispersed
Lcy6g1277 Lcy-Chr6:16048770 Lcy7g0086 Lcy-Chr7:813779 2.05E-69 dispersed
Lcy7g0086 Lcy-Chr7:813779 Lcy9g1459 Lcy-Chr9:39622693 3.28E-126 dispersed
Lcy7g0986 Lcy-Chr7:10241253 Lcy7g0086 Lcy-Chr7:813779 4.11E-68 dispersed
Lcy9g0533 Lcy-Chr9:16624107 Lcy7g0086 Lcy-Chr7:813779 6.08E-68 dispersed
Lcy9g1023 Lcy-Chr9:33684062 Lcy7g0086 Lcy-Chr7:813779 3.89E-66 dispersed
Lcy7g0086 Lcy-Chr7:813779 Lcy3g2167 Lcy-Chr3:48561035 4.65E-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66059 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0086 - - - 0.0