Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0109 | ATGGCTCTCCTTCATCTCTCTCCATGGCTTCCCCTCATCATCTTTTCCACTCTACTTCTCTTCATCCTAAAAATGAAGAAAACTGCAAATAGAGAAAAGGGTCGTCGTATTCCCCCAAGCCCACCAAAGCTTCCAATTATAGGAAACTTGCACCAAATTGGGAAGCTCCCTCACAGATCTCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTCAGCCTCGGCGGCATCCAAACCATCGTCATATCCTCAGCCGACGCCGCCCGCGCCCTCTTGAAAACCCACGATCTTCAAAGCTGCAGCAGACCACAGACTGAAAATGTCAAGAAACTCACTCACAACTTCATCGACGTTGTATTTTCGCCTTATGGTGATTACTGGCGAGAGATGCGCAAGATTTGTGTGCTCGAGCTTTTCAGCGTGAAGAGGGTGAAATCTTATGAACCCATTAGAGAACAGGAAGTTGCTTCGCTTGTCCAATCAATTTCGGAATTGGCTTCGACAGGAAGTGCTGTTGATCTTAGTGAGAAGTCCATCGCTCTCACTACTGGTATTATTTTCAGAATTGCTTTTGGGAAGAAGTTTGAAGGGTATGGATTTCATGAGCTTGTGAGTGAGGCTGAGGTCTTGTTGGGAAGCTACAGTGCTTCTGAGCTTTTTCCTGTTCCATTTGTGGGGAAGGTCATTGATTGGCTGAGTGGAAGAAAAACTAGACTTGAGAAGGTTTTTAATGAGTTGAATGCTTTGTTTCAAGAAGTGATTGATGAACATCTTTGCACAGAGAGAGCTAAGCCAGAGCAAGATGATATTATTGATGTGCTTTTGGCAATCAACAAAAAGAGAGTTGAGCCTTGTGCTGTTGCCATTACTCATGAAAATATCAAAGCCATTCTTTTGAACATATTTTTGGCTGGATTAGACACTAGTTCCATTACACTAGTATGGGCAATGGCAGAGCTTGCTAAGAAACCAAAATTGATGAAGAAAGTGCAAGAAGAAATCAGAAATTGCATAGGAAACAGAGGAAAGGTAACAGAGAATGACACAGAAGAGCTTCCATATTTGAAAATGATAGTGAAAGAGACGTTGAGACTGCATCCACCAGCACCCCTTCTTGTTCCAAGAGAAATCATGTCCCATTTCAAAATTGAAGGCTACGATTTTTACCCCAAAACAATAGTTCAAGTGCACGCTTGGGCAATTGGACGAGACCCCAAATGTTGGATAGACCCCGAAGAGTTTATTCCGGAGCGATTTGCAGAGAGCTTTGTTGATTACAAAGGACAACATTTTGAGTTCTTGCCATTTGGGGCTGGTCGGAGGATTTGCCCCGGGTTGAATATGGGGGTGAAGACTGTGGAGTTTGCTTTGGCAAATCTTTTGTATCATTTTGATTGGAAGTTGCCAAAGGGGATGAAGGAGGAAGATTTGGACATGGAAGAAACGTCAGGTTTTAGCCTCACCATCTACAAGAAGTTGCCTCTCATACTTGTGCCAATCTCACACCATCCTTGA | 1521 | 43.85 | MALLHLSPWLPLIIFSTLLLFILKMKKTANREKGRRIPPSPPKLPIIGNLHQIGKLPHRSLWRLSQLYGPIISLSLGGIQTIVISSADAARALLKTHDLQSCSRPQTENVKKLTHNFIDVVFSPYGDYWREMRKICVLELFSVKRVKSYEPIREQEVASLVQSISELASTGSAVDLSEKSIALTTGIIFRIAFGKKFEGYGFHELVSEAEVLLGSYSASELFPVPFVGKVIDWLSGRKTRLEKVFNELNALFQEVIDEHLCTERAKPEQDDIIDVLLAINKKRVEPCAVAITHENIKAILLNIFLAGLDTSSITLVWAMAELAKKPKLMKKVQEEIRNCIGNRGKVTENDTEELPYLKMIVKETLRLHPPAPLLVPREIMSHFKIEGYDFYPKTIVQVHAWAIGRDPKCWIDPEEFIPERFAESFVDYKGQHFEFLPFGAGRRICPGLNMGVKTVEFALANLLYHFDWKLPKGMKEEDLDMEETSGFSLTIYKKLPLILVPISHHP | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1004262 | 1006241 | - | Maker00026099 | Lcy7g0109 | 636941 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0109 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0109 | 506 | SUPERFAMILY | Cytochrome P450 | 38 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | FunFam | Cytochrome P450 83B1 | 23 | 500 | - | - | |
| Lcy7g0109 | 506 | Gene3D | Cytochrome P450 | 22 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PANTHER | CYTOCHROME P450 71B11-RELATED | 15 | 502 | IPR050193 | - | |
| Lcy7g0109 | 506 | CDD | CYP71-like | 68 | 497 | - | - | |
| Lcy7g0109 | 506 | Pfam | Cytochrome P450 | 38 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0109 | 506 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0109 | Lcy-Chr7:1004262 | Lcy7g0112 | Lcy-Chr7:1014749 | 0 | dispersed | |
| Lcy7g0109 | Lcy-Chr7:1004262 | Lcy7g0110 | Lcy-Chr7:1008013 | 3.70e-315 | tandem | |
| Lcy7g0109 | Lcy-Chr7:1004262 | Lcy9g2181 | Lcy-Chr9:46468297 | 1.29E-17 | wgd |
Pathway information