Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0110 | ATGCTTCATCTTCCCTATCAGGAGAAAGAGTGCGAACAAAAAAATGCTGGAAATCGCCATGGAAAGAAACAGCTTGAGAAAGCTCGTGCGCAAGAGAGTTACAGCTATGCGGGCATTTGGAGAAGGAGACCACCTTCGCTTCAGGCCCCAAATTTTTTTATCTCTTCCGCAATGATCACTAGCTCCAACAGGTCTGATCCCAGCTTTTCGTTGAGGATGCCCATGACGTCACTCGAGTCTGATTCAACTTCGAGAGGCTTGAATCGACTTGTCCATCCGTCCAATTTTCCATTAATAACTAATGGATTATTAACAAAAAAGGGTCGTCTTCCTCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAAATTGGGAAGCTCCCTCACATATCCCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTCAACCTCGGCGGCATTCGAACCACCGTTATATCCTCAGCCGACGCCGCCCGCGCCCTCTTGAAAACCCACGATCTTCAGAGCTGCAGCAGACCACAAACTCAAAATATCAAGAAACTCACTTACAACTTCCTCGACGTTGCCTTTTCGCCTTATGGAGATTACTGGCGAGAGATACGCAAGATTTGTATGCTCGAGCTTTTCAGTGTGAAGAGGGTGAAATCTTATGAACCCATCAGAGAACAGGAAGTTGGTTTGCTTGTGGAATCGATTTCGGAACTGGCTTCGAGTGGAAGTGCTGTTGATCTTAGTGAGAAGACCCTTGCTCTCACAGCTGGTGTTATTTTCAGAATTGCTTTTGGGAAGAAGTTAGAAGGGTGTGGATTTCACGAGCTTGTGAGTGGGGCTGAGGCCATGTTGGGAAGCTACAGTGCTTCTGAGTATTTGCCTGTTCCATTTGTGGGGAAGGTCATTGATTGGGTGAGTGGAAGAAAAACTAGACTTGAAAAGGTTTTTAATGAGTTGAATGCTTTGCTTCAAGAGATGATTGATGAACATCTTTGTCCTGAGAGAGCTAAGCCAGAGCAAGATGATATTATTGATGTGCTTTTGGCAATCAACAAAGAGAAAGTCGAGCCTTGCACTGTTTCCATTACTCATGAAAATATCAAAGCCATTCTTATGAACATATTTTTGGCTGGATTAGACACTAGTTCCATTACAATGGTATGGGCAATGGCAGAGCTTGCTAAGAGATCAAAATTGATGAAGAAAGCGCAAGAAGAAATCAGAAATTACATAGGAAACAAAGGAAAGGTAACAGAAAATGACACAGAAGAGCTTCCATATCTGAAAATGATAGTGAAAGAGACGTTGAGACTGCATCCACCAGCACCCCTTCTTCTTCCAAGAGAAATCATGTCCCATTTCAAAATTGAAGGCTACGACTTTTACCCCAAAACAATGGTTCAAGTGAACGCTTGGGCAATTGGACGAGATCCCAAATGCTGGACAGATCCTGAAGAGTTCATTCCGGAGCGATTTGCAGAGAGATCTGTTGATTACAAAGGACAACATTTTGAGTTCTTGCCATTTGGGGCTGGTCGGAGGATTTGCCCCGGGTTGAATATGGGGGTGAAAACCGTGGAGTTTGGTTTGGCGAATCTTTTGTATCATTTTGATTGGAAGTTGCCAAAGGGGATGAAGGAGGAAGATTTGGACATGGAAGAAACTTCAGGTTTTAGCCTCACCATCTACAAGAAGTTGCCTCTCATACTTGTGCCAATCTCATACCATCCATGA | 1740 | 44.37 | MLHLPYQEKECEQKNAGNRHGKKQLEKARAQESYSYAGIWRRRPPSLQAPNFFISSAMITSSNRSDPSFSLRMPMTSLESDSTSRGLNRLVHPSNFPLITNGLLTKKGRLPPSPPKLPIIGNLHQIGKLPHISLWRLSQLYGPIISLNLGGIRTTVISSADAARALLKTHDLQSCSRPQTQNIKKLTYNFLDVAFSPYGDYWREIRKICMLELFSVKRVKSYEPIREQEVGLLVESISELASSGSAVDLSEKTLALTAGVIFRIAFGKKLEGCGFHELVSGAEAMLGSYSASEYLPVPFVGKVIDWVSGRKTRLEKVFNELNALLQEMIDEHLCPERAKPEQDDIIDVLLAINKEKVEPCTVSITHENIKAILMNIFLAGLDTSSITMVWAMAELAKRSKLMKKAQEEIRNYIGNKGKVTENDTEELPYLKMIVKETLRLHPPAPLLLPREIMSHFKIEGYDFYPKTMVQVNAWAIGRDPKCWTDPEEFIPERFAERSVDYKGQHFEFLPFGAGRRICPGLNMGVKTVEFGLANLLYHFDWKLPKGMKEEDLDMEETSGFSLTIYKKLPLILVPISYHP | 579 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1008013 | 1012405 | - | Maker00026132 | Lcy7g0110 | 636942 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0110 | 579 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 511 | 520 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0110 | 579 | PANTHER | CYTOCHROME P450 71B11-RELATED | 103 | 575 | IPR050193 | - | |
| Lcy7g0110 | 579 | SUPERFAMILY | Cytochrome P450 | 111 | 574 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | Gene3D | Cytochrome P450 | 103 | 568 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 368 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 472 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 138 | 157 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 256 | 274 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 388 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 431 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 508 | 518 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | E-class P450 group I signature | 518 | 541 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | CDD | CYP71-like | 141 | 570 | - | - | |
| Lcy7g0110 | 579 | Coils | Coil | 402 | 422 | - | - | |
| Lcy7g0110 | 579 | FunFam | Cytochrome P450 83B1 | 98 | 573 | - | - | |
| Lcy7g0110 | 579 | PRINTS | P450 superfamily signature | 379 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | PRINTS | P450 superfamily signature | 509 | 518 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0110 | 579 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Lcy7g0110 | 579 | Coils | Coil | 311 | 331 | - | - | |
| Lcy7g0110 | 579 | Pfam | Cytochrome P450 | 111 | 563 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0110 | Lcy-Chr7:1008013 | Lcy7g0112 | Lcy-Chr7:1014749 | 5.50E-306 | dispersed | |
| Lcy7g0109 | Lcy-Chr7:1004262 | Lcy7g0110 | Lcy-Chr7:1008013 | 3.70e-315 | tandem | |
| Lcy7g0110 | Lcy-Chr7:1008013 | Lcy7g0111 | Lcy-Chr7:1010988 | 2.66E-176 | tandem |
Pathway information