Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0112 | ATGGCTCTCCTTCATCTCTCTCCATGGCTTCCCCTCATCATCTTTTTCTCTCTACTTCTCTTCATCCTAAAACTAAAGAAAACTTCAAAAAGAAAAAATGGTCGTCTTCCCCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAAATTGGGAAGCTCCCTCACAGATCCCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTCAACCTCGGCGGTATTCGAACCACCGTTATATCCTCAGCCGACGCCGCCCGCGCCCTCTTGAAAACCCACGATCTTCAGAGCTGCAGCAGACCACAAACTCAAAATGTCAAGAAACTCACTCACAACTTCCTCGACGTTGCCTTTTCGCCTTATGGAGATTACTGGCGAGAGATACGCAAGATTTGTGTGCTCGAGCTTTTCAGTGTGAAGAGGGTGAAATCTTATGAACCCATTAGAGAACAGGAAGTTGGTTTGCTTGTGGAATCGATTTCGGAACTGGCTTCGAGTGGAAGCGCTGTTGATCTTAGTGAGAAGTCCATAGCTCTCACTACTGGTGTTATTTTCAGAATTGTTTTTGGGAAGAATTTTGAAGGGTGTGGATTTCATGAGCTTGTGAGTGAGGCTGAGGCCTTGATGGGAAGCTACAGTGCTTCTGAGTTTTTTCCTGTTCCATTGGTGGGGAAGTTCATTGATTGGGTTAGCGGAAGAGAAACTAGAGTTGAGAAGGTTTTTAATGAGTTGAATGCTTTGTTTCAAGAGGTGATTGATGAACATCTTTGCCCTGGGAGAGCTAAGCCAGAGCAAGATGATATTATTGATGTGCTTTTGGCAATCAACAAAAAGAGAGTTGAGCCTTGTACTATTGTCATTACTCATGAAAATATCAAAGCCATTCTTTTGAACATATTTTTGGCAGGATTAGACACTAGTTCTATTACAATAGTATGGGCAATGGCAGAGCTTGCCAAGAAACCAAAGTTGATGAAGAAAGCGCAAGAAGAAATCAGAAATTACATAGGAAACAGAGGAAAGGTAACAGAGAATGACATAGAAGAGCTTCCATATCTGAAAATGATAGTGAAAGAGACGTTGAGACTGCATCCACCAGCACCCCTTCTTCTTCCAAGAGAAATTATGTCTCATTTCAAAATTGAAGGCTACGATTTTTACCCCAAAACAGTGGTTCAAGTGAACGCTTGGGCAATTGGACAAGACCCCAAATGTTGGAAAGATCCAGAAGAGTTCATTCCGGAGCGATTTGCAAAGAGCTCTATTGATTACAAAGGACAATATTTTGAGTTCTTGCCATTTGGGGCTGGTCGAAGGATTTGCCCCGGGTTGAATATGGGGGTGAAAATCGTGGAGTTTGCTTTGGCGAATCTTTTGTACCATTTTGATTGGAAGTTGCCGAAGGGGATGAAGGAGGAAGATTTGGACATGGAAGAAATTTCAGGAGCTGACGAAGACAACCGGACAGAGATAGGGCCAGGAAACCGACCCAGAGGAAGACCGGACCAAAGGGTCGGGCCAACATATGGTCAGCCTCTTGCCAAGGCCGAGGTCGAGCATAATGTTCGGCCTCTTGCCGAGGCCGAGGCCTAG | 1602 | 44.94 | MALLHLSPWLPLIIFFSLLLFILKLKKTSKRKNGRLPPSPPKLPIIGNLHQIGKLPHRSLWRLSQLYGPIISLNLGGIRTTVISSADAARALLKTHDLQSCSRPQTQNVKKLTHNFLDVAFSPYGDYWREIRKICVLELFSVKRVKSYEPIREQEVGLLVESISELASSGSAVDLSEKSIALTTGVIFRIVFGKNFEGCGFHELVSEAEALMGSYSASEFFPVPLVGKFIDWVSGRETRVEKVFNELNALFQEVIDEHLCPGRAKPEQDDIIDVLLAINKKRVEPCTIVITHENIKAILLNIFLAGLDTSSITIVWAMAELAKKPKLMKKAQEEIRNYIGNRGKVTENDIEELPYLKMIVKETLRLHPPAPLLLPREIMSHFKIEGYDFYPKTVVQVNAWAIGQDPKCWKDPEEFIPERFAKSSIDYKGQYFEFLPFGAGRRICPGLNMGVKIVEFALANLLYHFDWKLPKGMKEEDLDMEEISGADEDNRTEIGPGNRPRGRPDQRVGPTYGQPLAKAEVEHNVRPLAEAEA | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1014749 | 1017567 | - | Maker00025807 | Lcy7g0112 | 636944 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0112 | 533 | MobiDBLite | consensus disorder prediction | 482 | 533 | - | - | |
| Lcy7g0112 | 533 | SUPERFAMILY | Cytochrome P450 | 37 | 479 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | Pfam | Cytochrome P450 | 37 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | Coils | Coil | 328 | 348 | - | - | |
| Lcy7g0112 | 533 | FunFam | Cytochrome P450 83B1 | 23 | 494 | - | - | |
| Lcy7g0112 | 533 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | MobiDBLite | consensus disorder prediction | 482 | 500 | - | - | |
| Lcy7g0112 | 533 | Gene3D | Cytochrome P450 | 21 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0112 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0112 | 533 | PANTHER | CYTOCHROME P450 71B11-RELATED | 14 | 486 | IPR050193 | - | |
| Lcy7g0112 | 533 | CDD | CYP71-like | 67 | 486 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0109 | Lcy-Chr7:1004262 | Lcy7g0112 | Lcy-Chr7:1014749 | 0 | dispersed | |
| Lcy7g0110 | Lcy-Chr7:1008013 | Lcy7g0112 | Lcy-Chr7:1014749 | 5.50E-306 | dispersed | |
| Lcy7g0112 | Lcy-Chr7:1014749 | Lcy7g0118 | Lcy-Chr7:1055523 | 1.10E-295 | dispersed | |
| Lcy7g0111 | Lcy-Chr7:1010988 | Lcy7g0112 | Lcy-Chr7:1014749 | 2.86E-176 | tandem | |
| Lcy7g0112 | Lcy-Chr7:1014749 | Lcy7g0113 | Lcy-Chr7:1021279 | 1.28E-153 | tandem |
Pathway information