Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0114 | ATGCTTGGCCTTGATCAGATGATCCATGGCATTTTCATCTGGGTTCCTCTAATCTTGCTGTTATCTTCTCTGCTGCTTCTTAAAACGAAGAAGAAACTTGTTCCTCCAGGCCCTCCAAAGCTTCCTTTGTTGGGCCATCTGCACCTCATTGGCTCCCTCCCCCATCACTCTTTTTGGGAACTTTCAAAAAAGTATGGCCCCATCATGTTCCTCAAACTCGGCTCTGTCCCAGCCATCGTGATCTCCTCCGCCGCCGCTGCAAAGGAAGTGCTAAAAGTTCACGACCTTGCTTGTTGCAGCCGGCCTCGTTCGACCGCCAGTGGAAAATTTTCATACAACTATTTAGACATAGGTCTATCTCCATATGGTGATCACTGGAGGGACGTTCGAAAGATTTGTGTGCTTGAGCTGTTCAGTGCTAAGCGGGTGCAGTCATTTCAGCTGATTAGAGAAGAAGAGATTGATCTGCTGGTGAAATCCATCTCTGAATCCTCATCTAATTCTGGCAGTCCAATTGATCTGAGTGAGAAATTGTATTCTCTCACTGCAAATATAATAACCCGGATTGCTTTTGGAAAGAGCTTCAGAGGGGGTGAGCTGGATGATGAGAATTTTCAACAAGTGATTCGTAGAGGAGCGGAAGCAGCGGGAAGTTTCTCGGCGACTGACTCCTTTCCCCATGTGGGTTGGATTATTGATCGGCTCAGTGGTGTTCATAGTAGATTGGAGAAGAGTTTTGCTGAGTTGGATGCTTTCTTCCAACATGTAGTGGATGATCGCATCAAGTTTGGAGAGGCTTCTTTGGATGATCAAGAAAACATTGTCGATGTTTTGTTGAAAATGGAGAGAGGCCCCTCTCAATTTGATGTAGTGCCACTCACTAGAGATTGCATTAAGGCGCTGGTCATGGATATATTTATGGCTGGAGTGGAAACAGGAGCAAATGTCCTTGTTTGGGCAATGTCGGAGTTGATCAAGAATCCAATGGTCTTGAAGAAGCTACAAGGTGAGATCAGAAGCTGTGTAAAAGAAGATCAAGTGAAGGAGAGCGACCTTGAAAAGCTTCAATATCTAAAAGTGGTGGTGAAAGAGGTTCTAAGATTGCATGCACCACTTCCACTCTTGCTGCCAAGAGAAACCATGTCCCATTTCAAGCTTGATGGTAATGATATTGGGCCCAAAACCCAGCTTTTTGTCAACGTATGGGCAGTCGGACGTGACCCAGAGTTGTGGAAAAACCCAGAAGAGTTCTTGCCGGAGAGATTCATAGGAAGTAATATTGATTACAAAGGACAAAATTTCGAGTTATTACCGTTTGGATCTGGTCGAAGAATTTGTCCTGGAATGAATATGGCAACTATTATGGTGGAGCTGACACTGGCTAATCTGTTGTTATGTTTTGATTGGAAATTACCAAACAAAACGAAAGAAGAAGATGTAGACATGGAAGAGGATGTTGGTCTTACAGTTGCCAAGAAATCACCTCTTGTACTTGTTCCAATCCGTTACTTCAATAATTTCAATTAA | 1527 | 43.88 | MLGLDQMIHGIFIWVPLILLLSSLLLLKTKKKLVPPGPPKLPLLGHLHLIGSLPHHSFWELSKKYGPIMFLKLGSVPAIVISSAAAAKEVLKVHDLACCSRPRSTASGKFSYNYLDIGLSPYGDHWRDVRKICVLELFSAKRVQSFQLIREEEIDLLVKSISESSSNSGSPIDLSEKLYSLTANIITRIAFGKSFRGGELDDENFQQVIRRGAEAAGSFSATDSFPHVGWIIDRLSGVHSRLEKSFAELDAFFQHVVDDRIKFGEASLDDQENIVDVLLKMERGPSQFDVVPLTRDCIKALVMDIFMAGVETGANVLVWAMSELIKNPMVLKKLQGEIRSCVKEDQVKESDLEKLQYLKVVVKEVLRLHAPLPLLLPRETMSHFKLDGNDIGPKTQLFVNVWAVGRDPELWKNPEEFLPERFIGSNIDYKGQNFELLPFGSGRRICPGMNMATIMVELTLANLLLCFDWKLPNKTKEEDVDMEEDVGLTVAKKSPLVLVPIRYFNNFN | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1028546 | 1030165 | + | Maker00026007 | Lcy7g0114 | 636946 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0114 | 508 | FunFam | Cytochrome P450 83B1 | 22 | 499 | - | - | |
| Lcy7g0114 | 508 | PANTHER | CYTOCHROME P450 71B11-RELATED | 17 | 501 | IPR050193 | - | |
| Lcy7g0114 | 508 | SUPERFAMILY | Cytochrome P450 | 35 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | Pfam | Cytochrome P450 | 35 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | P450 superfamily signature | 446 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0114 | 508 | CDD | CYP71-like | 64 | 496 | - | - | |
| Lcy7g0114 | 508 | Gene3D | Cytochrome P450 | 26 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0114 | Lcy-Chr7:1028546 | Lcy7g0119 | Lcy-Chr7:1074101 | 2.33e-317 | dispersed | |
| Lcy7g0113 | Lcy-Chr7:1021279 | Lcy7g0114 | Lcy-Chr7:1028546 | 1.44E-287 | tandem | |
| Lcy7g0114 | Lcy-Chr7:1028546 | Lcy7g0115 | Lcy-Chr7:1032982 | 2.07E-98 | tandem | |
| Lcy7g0114 | Lcy-Chr7:1028546 | Lcy9g2180 | Lcy-Chr9:46464919 | 7.77E-18 | wgd |
Pathway information