Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0118 | ATGGTCGAGGTAGAGTGCATTATTTTTCTTTTCAATGATATTGATGTGTGTCTGCATGTCTATTTAATCCAAAGAAGAACGACCATTTTTTCATCATCTTCTCATCTTCTTCTTCTTGAACTCTTTCCAATGTCTCTCCTTCATGTTTTCCTCTTTTTCTCTCTACTTCTCTTCATCCTAAGAATGAAGAAAACTTCAAATAGAAAAAAGGGTCGTCTTCCTCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAAATCGGAAAGCTCCCTCACAGATCCCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTAAGCCTCGGCGGCATCCAAACAACCGTCATTTCCTCAGCCAACGCCGCCCGCGCCCTCATGAAAACCCATGATCTTCAGAGCTGCAGCAGACCACAAACTCAAAATATCAAGAAACTCACTCACAACTTCCTCGACCTCGCCTTTACGCCTTATGGTGATTACTGGCGAGAGATACGCAAGATTTGTGTGCTTGAGCTTTTCAGTGTGAAGAGGGTGAAATCTTATGAACCCATCAGAGAACAGGAAGTTGCTTCGCTTATCGAATCAATTTCGGAATTGGCTTCGAGTGGAAGCGCTGTTGATCTTAGTGAGAAGTCCATTGCTCTCACTGCTGGTATTATTTTCAGAATTGCTTTTGGGAAGAAGTTAGAAGGGCGTGGGTTTGACGAGCTTGTGAATGAGGCTCAGGCCTTGTTAGGAAGCTATAGTGCTTCTGAATATTTTCCCGTTCCATTTGTGGGGAAGGTCGTTGATTGGCTGAGTGGAAACCATTCAAGACTTGAGAAGGTTTTTAATGAGTTGAATGCTTTGTTTCAAGAGGTGATCGACGAACACCTTCATCCTGAGAGAATAAAACCAGAGGAAGATGACATTATTGATGTGCTTCTTGATATAAACAAGCAGCAGGCTGCTGAACCGGCCATTGTTACCATTACTCATGAAAATATCAAGGCCATTCTTTTGAACATATTCTTGGGAGGATCAGACACTGGGTCCATTACCATGGTTTGGGCAATGGCAGAACTTGCCAAGGCACCAAAATTGATGAAAAAAGTTCAAAATGAAATCAGAAATTACGTGGGAAATAAAGGAAAGGTATCAGAAAGTGACACAGAAGAGCTTCCATATTTGAAAATGGTAGTGAAAGAGACGCTGAGACTACATCCTCCAGCGCCCCTTCTTGTTCCAAGAGAAACCATGTCCCATTTCAAAATTGAAGGCTACGATTTTTACCCGAAAACGATGGTTCAAGTGAACGCTTGGGCAATTGGACGAGACCCTAAGTGCTGGAAAAACCCAGAAGAGTTCATCCCTGAGAGATTTGAAGAGAGCTCCATTGATTACAGAGGACAACATTTCGAGTTGTTGCCGTTTGGAGCTGGTCGAAGAATTTGTCCTGGAATACATATGGGTGTGAAGACCGTGGAGTTGGCTCTGGCTAATCTTCTGTACCATTTTGATTGGAAGTTGCCAGAGGGGATGAAGGAGGAGGACTTGAACATGGAAGAGATTGCAGGTTTTAGCCTCACAATCTACAAGAAATTGCCTCTCAAACTCGTGCCAGTCTCATATATCATCCATGAGTTGAAGAAGAGTTCATGA | 1653 | 43.44 | MVEVECIIFLFNDIDVCLHVYLIQRRTTIFSSSSHLLLLELFPMSLLHVFLFFSLLLFILRMKKTSNRKKGRLPPSPPKLPIIGNLHQIGKLPHRSLWRLSQLYGPIISLSLGGIQTTVISSANAARALMKTHDLQSCSRPQTQNIKKLTHNFLDLAFTPYGDYWREIRKICVLELFSVKRVKSYEPIREQEVASLIESISELASSGSAVDLSEKSIALTAGIIFRIAFGKKLEGRGFDELVNEAQALLGSYSASEYFPVPFVGKVVDWLSGNHSRLEKVFNELNALFQEVIDEHLHPERIKPEEDDIIDVLLDINKQQAAEPAIVTITHENIKAILLNIFLGGSDTGSITMVWAMAELAKAPKLMKKVQNEIRNYVGNKGKVSESDTEELPYLKMVVKETLRLHPPAPLLVPRETMSHFKIEGYDFYPKTMVQVNAWAIGRDPKCWKNPEEFIPERFEESSIDYRGQHFELLPFGAGRRICPGIHMGVKTVELALANLLYHFDWKLPEGMKEEDLNMEEIAGFSLTIYKKLPLKLVPVSYIIHELKKSS | 550 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1055523 | 1058880 | - | Maker00026156 | Lcy7g0118 | 636950 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0118 | 550 | CDD | CYP71-like | 104 | 534 | - | - | |
| Lcy7g0118 | 550 | SUPERFAMILY | Cytochrome P450 | 74 | 538 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PANTHER | CYTOCHROME P450 71B11-RELATED | 51 | 539 | IPR050193 | - | |
| Lcy7g0118 | 550 | Pfam | Cytochrome P450 | 74 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | P450 superfamily signature | 396 | 407 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | P450 superfamily signature | 343 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | Gene3D | Cytochrome P450 | 58 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0118 | 550 | FunFam | Cytochrome P450 83B1 | 60 | 537 | - | - | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 395 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 352 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 219 | 237 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 332 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 436 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0118 | 550 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy5g2175 | Lcy-Chr5:44799016 | Lcy7g0118 | Lcy-Chr7:1055523 | 8.21E-154 | dispersed | |
| Lcy7g0112 | Lcy-Chr7:1014749 | Lcy7g0118 | Lcy-Chr7:1055523 | 1.10E-295 | dispersed | |
| Lcy7g0115 | Lcy-Chr7:1032982 | Lcy7g0118 | Lcy-Chr7:1055523 | 7.97E-210 | dispersed | |
| Lcy7g0118 | Lcy-Chr7:1055523 | Lcy7g0121 | Lcy-Chr7:1090693 | 9.84E-187 | dispersed | |
| Lcy7g0118 | Lcy-Chr7:1055523 | Lcy7g0119 | Lcy-Chr7:1074101 | 6.38E-180 | tandem | |
| Lcy7g0118 | Lcy-Chr7:1055523 | Lcy9g2162 | Lcy-Chr9:46259392 | 2.04E-68 | wgd |
Pathway information