Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0122 | ATGCTCAGCATTTTCATCTTGATTCCTCTAATCTTACTGCTCTCTTCTACATTGCTTCTTAAACCAAAGAAGAAGCTTCTTCCTCGAGGCCCTCCAAAGCTTCCATTGTTGGGTCATCTGCACCTCCTTGGCTCTCTTCCCCATCGATCTCTGTGGAAACTCTCAAAAAAACATGGCCCCATCATGCTTCTCAAATTCGGCGCCGTCCCAACCCTCGTAATCTCCTCAGCCGCCGCTGCAAAAGAGATGTTCAAACTCCACGATCTCGCTTCTTGCAGCCGCCCTCGCTTAGCGGCAACCGGAAGATTTTCGTACAACTTTTCAGACCTAAATTTTTCGCCATACGGCGATCGCTGGAGAGAGCTTCGAAAGATTTGTGTGCTTGAGCTCTTCAGCGCCAAACGGGTGCAGTCGTTTCAGCATATTCGAGAAGAGGAAGTGGGTCTACTGTTGAAGTCCATCTCTCGATCAACTCTAGTTGAAATGAAGGAGAAATCTTATTCTCTGACTGCGAATATAATGGCCCGGGTTGTTTTTGGCACGAGCTTTAGAGGGAATGAGCTAGATAATGAAAATTTTCATCGAGTTGTTCAGAGAGTGAGTGTGGCGTTGGGAAGCTTCTCGGCGACCGACTTCTTTCCCGCTTTCGGTTGGATTATCGATCGGCTCAATGGTGTTCATGGGAGGCTGGAGAAAAGCTTTGCTGAATTGGATGCTTTCTTCCAACGTGTGGTTGATGATCGCATAAAGTTTGGAGCAACAACTTCTAAGAGTGAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAGAGACTGCTCCGAATCTGATGGTCTGCAACTTACTAAAGATTGCATCAAGGCACTTATCATGGACGTATTTTTAGCTGGAGTGGAGTCAGGAGCAGGGACCATTCTCTGGGCAATGTCAGAATTGATTAAGAATCCAAGAGTGATGAAGAAGCTACAAGACGAGATCAGGACCTGCATAAAAGAAGATCAAGTAAAGGAGAGCGATCTCGAAAAGCTTAAATATCTAAAAATGGTTGTGAAAGAGGTTCTAAGGTTGCATGCGCCCGCTCCACTTCTCCTTCCAAGGGAAACCATGTCTCATTTCAAACTAAGTGGTTACGATATTGACCCCAAAACTCATGTCCATGTCAATATATGGGCGATTGGACGAGACCCAAATTCTTGGACTAACCCAGAAGAATTCTTGCCTGAGAGATTCATAAGAAGCAATATCGATTACAGAGGGCAAAATTTCGAGTTGTTACCATTTGGAGCTGGTCGAAGAATTTGTCCTGGTATAAACATGGGGATCGTTACTGTGGAGCTGGCATTGGCGAATCTATTGTTATGTTTTGATTGGAAATTGCCGCATGGAATGAAAGAAGAAGATGTTGACATGGAAGAGGATGTTGGTGTAACAGCTACAAAGAAAACACTTCTTAAACTTATACGATCAAAGAAGGTAGATAATCCTCGTAAGGAACCTCCACTTCCTGTGGCTGAAAATGCTCCTTCTGGGATGTTTATCCTTAGCGCTAATTCCCATAAATTTAGCAACTTCATCAATCAACCCAAATTGCCAAAACCCGCTACCAACAAAACCAAAATGCTTAGCCTCGTTCCTCTGATGCACACCATTTTCATCTGGGTTCCTCTAATCTTGCTTTCATCTTCTCTACTTCTCCTCAAAACGAAGATCTTTGCAACACACAACAACAACAACAACAACAAGAAAAGCCTTCTTCCTCCCAGCCCTCCAAAGCTTCCTCTGTTGGGCCATCTGCACCTCATCGGCTCCCTCCCCCACCGCTCTTTTTGCCAACTTTCAAAACAACACGGCCCCGTCATGCTCCTCAAACTCGGCTCCGTCCCAACCATCGTAATCTCCTCCGCCGCCGCCGCAAGAGACCTCTTTAAACTCCACGACCTCGCTTCTTGCAGCCGCCCTCTCTTATACGGCAATGGAAGACTGTCCTACAACTATCTCGACATGAGTTTCTCTCCATACGGCGACCACTGGAAGGAAGTTCGAAAGATATGCGTGTCCGAGCTCTTCAACTCGTGGCGGGTTCAGTCGTTTCAGCTCATTAGAGAAGAAGAGGTGGGATTGTTGTTGAACTCCATCGCTGAATCCTCGTCTTCTGCAACTCCGGTTGATCTGAGTGAGAAATCCTATTCTCTCACTGCAAACATAATAACCCGGATGGCTTTTGGGAAGAGCTTTAGAGGGGGTGAGCTGGACGATGAGAATTTTCAAGGTGTTGTTCGAAGAGCGGTGGCAGCAATGGGAAACTTCTCGGCGGACTTCTTTCCCAGAGTGGGTTGGATTGTTGATTGGCTCAGTGGCGCTCGTGGGAGGTTGGAGAAGACCTTTGCTGAGTTGGATGCCTTTTTCGAACATGTAATTGATGATCGCATCAACTTCGTCGAGAGGAGTTGTGACAATGAAGAGAACGTTATCGATGTTCTCTTGAAATTGGAGAGAGAACGCTCTGCTGACTCTGGTGGTTTGCAACTTACTAGAGATTGCATCAAGGCACTTACCATGGATATATTTCTAGCTGGAGTTGACACAGGAGCCGGGGTCATTGTTTGGGCAATGGCAGAGCTGGTTAGGAATCCAAGGGTGATGAAAAAGCTACAAGATGAGATAAGAAACTGCATAAAAGAAGATCAAGTGAAGGAAAGTAAGCTCGAAAAGCTTGAATATCTAAAAATGGTTGTGAAAGAGGTTCTAAGATTGCACCCTACCGTCCCACTTCTCCTTCCAAGAGAAACCATGTCTCATTTCAAGCTCAACAATTACGATATTGACCCCAAAACTCATCTTTATGTCAATGTTTGGGCGATCGGACGAGACCCAAATTACTGGCCTAACCCAGAAGAATTCTTGCCGGAGAGATTTATAGGTAGCGATATAGATTACAAAGGACAAAATTTTGAGTTTTTGCCATTTGGAGCTGGTCGAAGAAGTTGTCCAGGGACGAACATGGCCATCATTGCAGTGGAGCTCACGCTAGCTAATCTGTTACTTTCTTTTGATTGGAAATTACCAGATGGAATGAAAGAAGAAGATTTGGACATGGAAGAGGATGCTGGTCTAACTGTTACCAAAAAATCACCTCTTAAACTCATTCCAATTTGCCACTAA | 3162 | 44.97 | MLSIFILIPLILLLSSTLLLKPKKKLLPRGPPKLPLLGHLHLLGSLPHRSLWKLSKKHGPIMLLKFGAVPTLVISSAAAAKEMFKLHDLASCSRPRLAATGRFSYNFSDLNFSPYGDRWRELRKICVLELFSAKRVQSFQHIREEEVGLLLKSISRSTLVEMKEKSYSLTANIMARVVFGTSFRGNELDNENFHRVVQRVSVALGSFSATDFFPAFGWIIDRLNGVHGRLEKSFAELDAFFQRVVDDRIKFGATTSKSEENIVDVLLKMERDCSESDGLQLTKDCIKALIMDVFLAGVESGAGTILWAMSELIKNPRVMKKLQDEIRTCIKEDQVKESDLEKLKYLKMVVKEVLRLHAPAPLLLPRETMSHFKLSGYDIDPKTHVHVNIWAIGRDPNSWTNPEEFLPERFIRSNIDYRGQNFELLPFGAGRRICPGINMGIVTVELALANLLLCFDWKLPHGMKEEDVDMEEDVGVTATKKTLLKLIRSKKVDNPRKEPPLPVAENAPSGMFILSANSHKFSNFINQPKLPKPATNKTKMLSLVPLMHTIFIWVPLILLSSSLLLLKTKIFATHNNNNNNKKSLLPPSPPKLPLLGHLHLIGSLPHRSFCQLSKQHGPVMLLKLGSVPTIVISSAAAARDLFKLHDLASCSRPLLYGNGRLSYNYLDMSFSPYGDHWKEVRKICVSELFNSWRVQSFQLIREEEVGLLLNSIAESSSSATPVDLSEKSYSLTANIITRMAFGKSFRGGELDDENFQGVVRRAVAAMGNFSADFFPRVGWIVDWLSGARGRLEKTFAELDAFFEHVIDDRINFVERSCDNEENVIDVLLKLERERSADSGGLQLTRDCIKALTMDIFLAGVDTGAGVIVWAMAELVRNPRVMKKLQDEIRNCIKEDQVKESKLEKLEYLKMVVKEVLRLHPTVPLLLPRETMSHFKLNNYDIDPKTHLYVNVWAIGRDPNYWPNPEEFLPERFIGSDIDYKGQNFEFLPFGAGRRSCPGTNMAIIAVELTLANLLLSFDWKLPDGMKEEDLDMEEDAGLTVTKKSPLKLIPICH | 1053 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1098208 | 1104347 | + | Maker00025919 | Lcy7g0122 | 636954 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0122 | 1053 | PRINTS | P450 superfamily signature | 910 | 921 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | P450 superfamily signature | 858 | 875 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | P450 superfamily signature | 987 | 996 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | SUPERFAMILY | Cytochrome P450 | 28 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | SUPERFAMILY | Cytochrome P450 | 586 | 1050 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | FunFam | Cytochrome P450 83B1 | 15 | 487 | - | - | |
| Lcy7g0122 | 1053 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0122 | 1053 | Gene3D | Cytochrome P450 | 570 | 1048 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | Gene3D | Cytochrome P450 | 19 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | CDD | CYP71-like | 57 | 484 | - | - | |
| Lcy7g0122 | 1053 | FunFam | Cytochrome P450 83B1 | 572 | 1049 | - | - | |
| Lcy7g0122 | 1053 | CDD | CYP71-like | 615 | 1046 | - | - | |
| Lcy7g0122 | 1053 | Pfam | Cytochrome P450 | 28 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | Pfam | Cytochrome P450 | 586 | 1042 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 989 | 998 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0122 | 1053 | PANTHER | CYTOCHROME P450 71B11-RELATED | 6 | 487 | IPR050193 | - | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 909 | 927 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 950 | 974 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 847 | 864 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 986 | 996 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 867 | 893 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 996 | 1019 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 613 | 632 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0122 | 1053 | PRINTS | E-class P450 group I signature | 731 | 749 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0120 | Lcy-Chr7:1083709 | Lcy7g0122 | Lcy-Chr7:1098208 | 1.99E-174 | dispersed | |
| Lcy7g0122 | Lcy-Chr7:1098208 | Lcy7g0137 | Lcy-Chr7:1248511 | 1.68E-180 | dispersed | |
| Lcy7g0121 | Lcy-Chr7:1090693 | Lcy7g0122 | Lcy-Chr7:1098208 | 3.12E-267 | tandem | |
| Lcy7g0122 | Lcy-Chr7:1098208 | Lcy9g2156 | Lcy-Chr9:46155079 | 5.35E-24 | wgd |
Pathway information