Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0137 | ATGGCCCACTTGGCTGGAAATTTTGGCTTTGATCTTGACCTACTGGTTGTGGGAGCAACATCCTGCTTGACATTAGTGGCTTTGTTGCTCACGTATCATTGTTGTCCGAGAAATTCGAGGAATGGTCCGATTTCAGCGCACTGCAAAATCTTAGAATTTGGAAGTGATGCTCTGTTTCTATTCCTGTTCTTGGAAGATAAACAGTCTGATATAATTTCAATCTCTCAATCTTCATCCCTTGCAATTCCAGTCGATCTGAGTGAGGAATCATATACTCTCACTGCAAATATAACAACACGAATAGCTTTTGGGAAGAGCTTTAGAGGGGGTGAACTAGATAATGGAAATTTTCACAAGGTTATCCGTAGAGCAATAGCAGCATTGGGAAGCTTCTCAGTGACTGACTTCTTTCCTACTGTGGGTTGGATTATTGATCGGCTCAGTGGTGTTCATGGGAGACTGGAGAAGAGCTTTGCTGAGTTAGATTCTTTTCTCCAACAAGTAATCGACGATCGCATCAACTTCAGGGCGACTTCTCAAAATGAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAGAGATCGCTCTGACCTTGATGCCCTACAACTCACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGGGCAGGCACCATTATTTGGGCCATGGCAGAGCTAGTTAAGAATCCACGAGTGATGAAAAAGTTACAGGATGAGATCAGAAGCTGCATAAAAGAAGATCAAGTGAAAGAGAATGACCTCGAAAAACTTGAGTATCTAAAATTGGTGGTGAAAGAGGTTCTAAGGTTGCGTGCACCTGCCCCACTTTTACTTCCAAGAGAAACCGTGTCCCATTTCAAGCTCAAGGGTTATGATATTGAACCTAGAGCTCATCTTCATGTTAATGTGTGGGCGATTGGGCGAGATCCAAATTATTGGACTAATCCAGAAGAATTGTTACCTGAGAGATTTATGGGAAGCAATATTGATTACAAAGGGCAGAATTTTGAGTTATTACCATTTGGAGCTGGTAGAAGAATCTGTCCTGGTATGAACATGGGGATTGTTACCATGGAGCTGACATTGGCTAATCTGTTGCTCCGTTTTAATTGGAAATTGCCATATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGTTGGTCTGACCGTTGCAAAGAAATCACCTCTAAAACTTGTTCCAATGAGCTACAGAGGTTAG | 1251 | 41.57 | MAHLAGNFGFDLDLLVVGATSCLTLVALLLTYHCCPRNSRNGPISAHCKILEFGSDALFLFLFLEDKQSDIISISQSSSLAIPVDLSEESYTLTANITTRIAFGKSFRGGELDNGNFHKVIRRAIAALGSFSVTDFFPTVGWIIDRLSGVHGRLEKSFAELDSFLQQVIDDRINFRATSQNEENIVDVLLKMERDRSDLDALQLTRDCIKAIIMDIFIAGVNPGAGTIIWAMAELVKNPRVMKKLQDEIRSCIKEDQVKENDLEKLEYLKLVVKEVLRLRAPAPLLLPRETVSHFKLKGYDIEPRAHLHVNVWAIGRDPNYWTNPEELLPERFMGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELTLANLLLRFNWKLPYGMKEEDMDMEEDVGLTVAKKSPLKLVPMSYRG | 416 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1248511 | 1253313 | - | Maker00026019 | Lcy7g0137 | 636969 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0137 | 416 | SUPERFAMILY | Cytochrome P450 | 83 | 411 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 350 | 359 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0137 | 416 | PANTHER | CYTOCHROME P450 71B11-RELATED | 79 | 412 | IPR050193 | - | |
| Lcy7g0137 | 416 | CDD | CYP71-like | 83 | 407 | - | - | |
| Lcy7g0137 | 416 | Gene3D | Cytochrome P450 | 63 | 414 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 357 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 270 | 288 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 228 | 254 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 93 | 111 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 311 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 347 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | E-class P450 group I signature | 208 | 225 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | FunFam | Predicted protein | 217 | 409 | - | - | |
| Lcy7g0137 | 416 | Pfam | Cytochrome P450 | 83 | 400 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | P450 superfamily signature | 219 | 236 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | P450 superfamily signature | 271 | 282 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0137 | 416 | PRINTS | P450 superfamily signature | 348 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy7g0121 | Lcy-Chr7:1090693 | Lcy7g0137 | Lcy-Chr7:1248511 | 6.11E-184 | dispersed | |
| Lcy7g0122 | Lcy-Chr7:1098208 | Lcy7g0137 | Lcy-Chr7:1248511 | 1.68E-180 | dispersed | |
| Lcy7g0137 | Lcy-Chr7:1248511 | Lcy2g0111 | Lcy-Chr2:850513 | 3.86E-84 | dispersed | |
| Lcy5g2175 | Lcy-Chr5:44799016 | Lcy7g0137 | Lcy-Chr7:1248511 | 5.48E-87 | wgd |
Pathway information