Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0159 ATGGAGGTCGACGGCGGAGCAGCGGCGGCTCAGCCGCGAAAATTCTCTCTCCCGGTGGACTCCGAACACAAATCCACCAAATTCAACATCTTCTCCGTCGCAGCACCGCACATGCGAGCGTTTCACCTCTCGTGGATTTCGTTCTGTGCCTGTTTCATTTCCAGTTTCGCGGCGGCGCCGCTGCTGCCGGTGATCCGCGACAACCTCAACCTGACGGACACCGACATTGGCAACGCCGGAATCGCGTCCGTCTCCGGCGCCGTCTTCGCTCGAGTCATGATGGGTTCGGCCTGCGACTTGGTCGGACCACGGCTGGCCTCCGCCGCGCTCATCTTGATAACCTCACCCGCGGTTTACCTGACCTCCATAGCGTCCTCCCCTGTTTCGTTCTTCCTCGTCCGTTTCTTCACCGGCTTCTCCCTCGCCACATTCGTCTCGACCCAGTTCTGGATGAGCTCGATGTTCTCGTCCACAGTCGTCGGCACCGCGAACGGCGTCGCCGGCGGGTGGGGGAACCTGGGCGGCGGCGCAACGCAACTCATCATGCCGTACGTGTTCGCCATCATCGAACACATCGGCGCCACGAAATTCACGGCGTGGAGAATCGCTTTCTTCATCCCGGCTCTGTTCCAGACGCTGTCGGCGTTCGCGATTCTGCTGCTCGGCCAGGATTCCCCGGACGGGAACTTCCGGCGGCTGCAGAAATCGGGCGACAAGGCGAAGGACAAATTCTCGAAGGTGCTGTACCACGGGGCGAGTAACTACAGGGGGTGGATTCTGGCATTGACTTATGGGTACTGTTTCGGAGTGGAATTGACGATCGACAACATAATCGCGAACTATTTCTACGACCGGTTCGATCTGAATCTGCACACGGCGGGGATAATAGCGGCGAGTTTTGGGCTGGCTAATTTGTTTTCGAGGCCGTACGGCGGGATATTGTCGGACGTGGTGGCGAGGAGGTACGGGATGAGGGGACGGCTGTGGGCGCTGTCATTGGGAGTGATATCGGGCATGACGGGCGGCGGCGGCAACGTGGGGTCAGTGTTGACTCAGCTGATATTCTTTCGAGGCTCAAGGTACACTAAAGAAAGAGGAATCACTCTAATGGGAGTGATGATAATCGGGTGCACTCTCCCGCTTCTGTTCATCTTTTTCCCGCAATGGGGCGGCATGCTGTGCGGCCCGTCGTCTAAGATTGCTTCTGAGGAAGACTATTACACGTCGGAGTGGAGCCCTGAAGAGCAGGCCAAGGGCTACCATTTGGCCAGCGTCAAGTTCGCTGAGAATAGTCGGCGTGAGCGAGGGAAGACCCACAAGGGCACTGCTGATGCCCAGGATGAGGCCTAG 1350 58.52 MEVDGGAAAAQPRKFSLPVDSEHKSTKFNIFSVAAPHMRAFHLSWISFCACFISSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARVMMGSACDLVGPRLASAALILITSPAVYLTSIASSPVSFFLVRFFTGFSLATFVSTQFWMSSMFSSTVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAILLLGQDSPDGNFRRLQKSGDKAKDKFSKVLYHGASNYRGWILALTYGYCFGVELTIDNIIANYFYDRFDLNLHTAGIIAASFGLANLFSRPYGGILSDVVARRYGMRGRLWALSLGVISGMTGGGGNVGSVLTQLIFFRGSRYTKERGITLMGVMIIGCTLPLLFIFFPQWGGMLCGPSSKIASEEDYYTSEWSPEEQAKGYHLASVKFAENSRRERGKTHKGTADAQDEA 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1434741 1438058 + Maker00025882 Lcy7g0159 636991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0159 449 Gene3D MFS general substrate transporter like domains 239 336 IPR036259 -
Lcy7g0159 449 CDD MFS_NRT2_like 41 336 IPR044772 GO:0015112(InterPro)
Lcy7g0159 449 FunFam High affinity nitrate transporter 2.5 33 229 - -
Lcy7g0159 449 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 331 IPR044772 GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Lcy7g0159 449 SUPERFAMILY MFS general substrate transporter 35 388 IPR036259 -
Lcy7g0159 449 MobiDBLite consensus disorder prediction 428 449 - -
Lcy7g0159 449 Gene3D MFS general substrate transporter like domains 34 230 IPR036259 -
Lcy7g0159 449 Pfam Major Facilitator Superfamily 45 380 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0317 Lcy-Chr11:5209662 Lcy7g0159 Lcy-Chr7:1434741 1.53E-184 dispersed
Lcy11g0320 Lcy-Chr11:5282798 Lcy7g0159 Lcy-Chr7:1434741 2.16E-184 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0159 K02575 - csv:101212365 730.324