Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0161 ATGAAACCCTACAGTTTCCCCTCTTCAATCGCATTGCTTCTGATTCTCTTGTGTCGTCTTGTCATTCAATCTGCGGCTGATCCAAGAGCCACTGAGGCGGCTCTGATATGTTCGAACAACACTGCTTCGCCGCCGGAGCGATCGACCTTCGTGTCGAATTTCTTGGCCTCCATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGATATGCAGACGTTGTGAATGGGACTGGAAATACGACTGTTTATGCCTTTGGCGAGTGTATGAATGATCTTTCGCAATCGGATTGCGATCTCTGTTTTGCGCAGATGAAAACTCAGATCCTGCGGTGTCTCCCCTTTCAGCTTGCTACTCGCGGGGGCAGACTCTTCTATGACGGGTGCTATGTTAGGTATGATTATTACAATTTCTTCAACGAATCTTTGAGTCCTGTGGATAAGGTTGTATGTGGGAAATCGGATTATAGAGGGAATCGGACCGTTTTTAGTGATAATGCTATGAAATTGGCGAGGAATTTGAGTGTAGTGGCGCCTAAGAACGATGGATTTGCTGTGGGATCGGTGACTTTTAGAAATGTGTCCGTCTTTGGATTGGCTCAGTGTTGGAAGTTTGTGAAAGGGGCTTCTTGCTCGAAGTGTTTGGTGGATGCAGCTAAGGAAATAGGTTCATGTCCCCCAAAAGCCGAAGGAAGGGTGTTGAATGCCGGCTGTTACTTCAGATATTCAACTGAACGATTTTATTTCAACAGCACGGCAACCTCCACTGGTGGAAATGGAAGGAGCCGTTTGGCGATAATTTTGGCATCAGTGTCTGCTGCCGTGGCTGCTGCATTGATTACGGCAACGGCTGTTTTCTGTGCCAGAAGGAGAGTAGTGAGGAAACGCAAAGAGAAAAAGCAACTCGGCCCTCTTGTGGCTATCATTAACAAGTCCAAGCTTAATTTTTCATACGAAACTCTTGAGAGGGCCACAAATTACTTTGACCAATCCAATAAACTCGGACAAGGAGGTTCTGGTTCGGTTTATAAAGGAACTCTATCAGATGGCAGAGTCGTAGCAATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGATCATTTCTTTAATGAAGTAAATTTGATTAGTGGCATCCGACACAAAAATCTTGTTGGGCTATTGGGATGCAGTATTACAGGCCCAGAAAGCCTCCTTGTTTATGAATACGTGCCAAATCAAAGCCTTCACGATTACCTTTTTGGTAACAATTTAACTTTAAAATTCCTTGCCTAA 1272 44.81 MKPYSFPSSIALLLILLCRLVIQSAADPRATEAALICSNNTASPPERSTFVSNFLASMDAVTPLIASQRYADVVNGTGNTTVYAFGECMNDLSQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSPVDKVVCGKSDYRGNRTVFSDNAMKLARNLSVVAPKNDGFAVGSVTFRNVSVFGLAQCWKFVKGASCSKCLVDAAKEIGSCPPKAEGRVLNAGCYFRYSTERFYFNSTATSTGGNGRSRLAIILASVSAAVAAALITATAVFCARRRVVRKRKEKKQLGPLVAIINKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNNLTLKFLA 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1450383 1456835 + Maker00026200 Lcy7g0161 636993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0161 423 ProSiteProfiles Protein kinase domain profile. 327 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0161 423 FunFam Cysteine-rich receptor-like protein kinase 2 293 402 - -
Lcy7g0161 423 FunFam Cysteine-rich receptor-like protein kinase 3 146 246 - -
Lcy7g0161 423 ProSiteProfiles Gnk2-homologous domain profile. 143 246 IPR002902 -
Lcy7g0161 423 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Lcy7g0161 423 Pfam Salt stress response/antifungal 37 134 IPR002902 -
Lcy7g0161 423 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 166 416 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Lcy7g0161 423 Gene3D Phosphorylase Kinase; domain 1 285 402 - -
Lcy7g0161 423 Gene3D - 145 246 IPR038408 -
Lcy7g0161 423 Gene3D - 31 137 IPR038408 -
Lcy7g0161 423 FunFam Cysteine-rich receptor-like protein kinase 2 30 137 - -
Lcy7g0161 423 Pfam Protein tyrosine and serine/threonine kinase 329 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0161 423 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524(InterPro)
Lcy7g0161 423 SUPERFAMILY Protein kinase-like (PK-like) 306 417 IPR011009 -
Lcy7g0161 423 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0161 Lcy-Chr7:1450383 Lcy5g1997 Lcy-Chr5:42978128 1.06E-40 dispersed
Lcy13g1270 Lcy-Chr13:29861599 Lcy7g0161 Lcy-Chr7:1450383 8.16E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66061 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0161 - - - 0.0