Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0195 ATGGATCTGGAAAGTGGGATTGATAGTGAAAAGAATGCGAAGAAAGACTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGCCTTGGCGTTGTCTATGGAGAGTTGGGGACTTCGCCTCTTTATGTCTATAAGAACACTTTTGCAGAAGAAGATATCCATCACACGAAGAGCAACGACGAGATTTATGGCGTTTTGTCCTTTGTTTTCTGGACTCTCACCATTGTTCCTCTGCTCAAGTACATATTTATCGTCCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACACGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTCACTGAGTACAAGATGGATGTCCTTGGTCCGCCATCTCAAGAAAGTTTTGGATTCAAACTCAAATCCGCCTTAGAAAAGCGTCGGGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGCATGGTGATAGGGGATGGCATCTTGACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTTGAGCATACCATGGCGAAAGAATATCACCAATGTAAGAATCTACACTTGCTCATCGTTAATTGGAATTTGACTTGTTTGTTTCTGAGGACTGGAAGTAGAAAAGTTCTGGTGTTCCTCCGTTGGAGGAGGAGGAGGAGGAGGATGGGGGTAAATACCTTATTTACTGTCAGAGTTAGTCTATTACTAACTACTTCCAGAAACACACCCAACTTCAGCACCACTATCCGAATGTACTGTGTAGATGATGTGTTTGCAAATATAGTAATCCCAATTTCATGCATTGTACTGATAGCCTTGTTTGCTCTTCAACACTACGGCACTCACAGGATTGGCTTCTTGTTTGCGCCCATTGTGACACTGTGGCTATTGTGTATCAGTGCCATTGGCTTGTACAATATTCTTCACTGGAATCCTGGTGTTTATAGAGCGATTTCTCCTCGTTACATGTTCCAATTTCTTAAGAAAACACAAAAGGGAGGTTGGATGTCACTTGGTGGAATTATGTTGTGCATTACTGGATCAGAGGCGATGTTTGCTGACCTTGGGCACTTTTCACAGTTGTCAATTAAGATTGCTTTCAGTTTTATGGTTTATCCGTCCCTCCTACTAGCCTACATGGGGCAAGCTGCCTACCTGTCTCAAAATTATACCACTCCAAATGATCATCGAATTGGGTTTTATGTATCTGTACCTGAGAAATTGAGGTGGCCTGTCCTTGTAATTGCTGTGCTTGCTGCCGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTCAAAATCGTCCATACATCCTCAAAAGTTCACGGTCAGATCTATATCCCGGAGATTAATTGGCTTTTGATGCTATTGTGCTTGGCCGTTACCCTAGGTTTCAGAGACACGAAGCGCTTGGGTCATGCCTCAGGTTTGGCAGTGATCACTGTCATGCTCGTTACTACGTGCTTAATGTCTCTCGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTCTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATCAAGTTTCTTGAAGGAGCTTGGGTTCCTATCGTAATTGCTTTTGTATTCCTGATAGTTATGTATGTCTGGCACTATGGTACTCTTAAGAAGTTTGAATTTGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTGGGTCCCAGCCTGGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAGACGGAGCTTGTTTCGGGAATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCTGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCGGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATTGGTCGTATTGGTACGAGTGAATATAGACTCTATAGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGACGTAGAGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGAGTGCAGAGTCTAGTGATTCCAAACAGGGCTTTGATAAAGATGGTGAAAAGATGACAGTTGTTGGGACATCTTCTTCTCATGAAGATAGAATTCAAATGGCTGAGACCGATAACTATGAAGACTCTGAAGAATTGTACAGAGCTTCGGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTCCGCTTCATCGTACCCGAGAGCCCGAAAATCAACAGGGATGCAAGGGCAGAACTACAAGAACTAATGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCACATATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTACATTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTAACTACCCTGTAGGTTTATCACAGTCATCATCAACCCTCGAGGTGGGTATGATGTATCTTGTTTAG 2577 43.54 MDLESGIDSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDIHHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMDVLGPPSQESFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEYHQCKNLHLLIVNWNLTCLFLRTGSRKVLVFLRWRRRRRRMGVNTLFTVRVSLLLTTSRNTPNFSTTIRMYCVDDVFANIVIPISCIVLIALFALQHYGTHRIGFLFAPIVTLWLLCISAIGLYNILHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFSFMVYPSLLLAYMGQAAYLSQNYTTPNDHRIGFYVSVPEKLRWPVLVIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKVHGQIYIPEINWLLMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIVIAFVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSLGPSLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIGTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGSAESSDSKQGFDKDGEKMTVVGTSSSHEDRIQMAETDNYEDSEELYRASDTREIRSPAPVQLRKRVRFIVPESPKINRDARAELQELMEAREGGVAYILGRSHMKAKQGSSMLKRVSIDYIYEFLRKNSREANYPVGLSQSSSTLEVGMMYLV 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1702649 1709159 + Maker00026116 Lcy7g0195 637027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0195 858 MobiDBLite consensus disorder prediction 708 733 - -
Lcy7g0195 858 Pfam K+ potassium transporter integral membrane domain 25 214 IPR053951 -
Lcy7g0195 858 Pfam K+ potassium transporter integral membrane domain 233 597 IPR053951 -
Lcy7g0195 858 Pfam K+ potassium transporter C-terminal domain 610 854 IPR053952 -
Lcy7g0195 858 NCBIfam potassium uptake protein 269 856 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy7g0195 858 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 271 857 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0268 Lcy-Chr10:4419899 Lcy7g0195 Lcy-Chr7:1702649 1.78e-310 dispersed
Lcy7g0195 Lcy-Chr7:1702649 Lcy7g1064 Lcy-Chr7:11363119 0 dispersed
Lcy10g1936 Lcy-Chr10:43445714 Lcy7g0195 Lcy-Chr7:1702649 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0195 K03549 - csv:101212925 1075.08