Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0200 ATGGAATTTAAGGGTCAAATTATTTGGGTTGTGATTCCATTTTTGGCGATGGTGAGCTTGGAAGGTTGCACTATTGCATTAACTATTATGGCAAAAACAGCCATTACTTATGGAATGAGCACTTTTGTTTTTGTTGTGTACACAAACGCTGTTGCTTCCACCATTCTTCTTCCTTATTCCTTCATCTTTCACTTCAACGACAGAACGGAATATCAACAATCTTTGTTTTCCTTTCCTCTTCTCCTCCGAATCTTCCTCTTGGGTCTCACAGGGATATGTATATCTCAGAACCTTGCATTTTTGGGCCTAAGCTACAGCTCTCCAATAGTTGTATGCGCAATGGGTCTTATGCTTCCAGCCATTTCCTTCATCCTTTCGATCCTTCTAAGGAGGACAAAAATTAACTGGAAAAGCCCAAGCTTCATTACCAAAGTAGTTGGCACAGTTATATCAGTTATAGGGGCAACATCCGAGGAGCTTTACTTAGGCCCAGTTGTTCGTCAACATCCTTCTTCTTCTTTACATTTACAATTCAAACAGAAGCTTTTCGTCTTCACTTCAACCACAGATCGTTGGATTTTGGGTGGCCTTTTATTAGCAGCTGCTTCCTTATGCGTCTCGATATGGAACATCATTCAGTTAGGAGTCATAAAACAATACTCTCAAGTGATGAAAGTTGCCTCCTTTTATAGTTTCGTCGGCACATTTCTCTCTGCAACTGTGGCTTTCTTTGTAGTTGACGATCCAAGTGCATGGAGAATCAAATCCAGCTTCGATCTCTTTCTCATTATTGCAACGGGAATTTTTAGCGGTTTGATCCGGAACCGAGTGCAAATATGGTGCATGCAAATGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGGATTCTTTTTGCAACTTTCTTTGGCGCCACCTTCTTTGGAGACACTTTTCACTACGGAAGTGTAATGGCAGCATTTATAGCTGGAATGGGATATTATACAGTAATGTGGGGCCAAATGAATGAAGAAGGAGAAGGAGAAGAGAAAAATAACAAGATCAGCAGTGATGATCTGTGTTCAGCCAAAGTTCCACTTCTGGATGAAGAATCAAAAGTGTAA 1107 40.83 MEFKGQIIWVVIPFLAMVSLEGCTIALTIMAKTAITYGMSTFVFVVYTNAVASTILLPYSFIFHFNDRTEYQQSLFSFPLLLRIFLLGLTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFILSILLRRTKINWKSPSFITKVVGTVISVIGATSEELYLGPVVRQHPSSSLHLQFKQKLFVFTSTTDRWILGGLLLAAASLCVSIWNIIQLGVIKQYSQVMKVASFYSFVGTFLSATVAFFVVDDPSAWRIKSSFDLFLIIATGIFSGLIRNRVQIWCMQMKGPYYVPMFKPFGILFATFFGATFFGDTFHYGSVMAAFIAGMGYYTVMWGQMNEEGEGEEKNNKISSDDLCSAKVPLLDEESKV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1777495 1779769 + Maker00025780 Lcy7g0200 637032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0200 368 PANTHER WAT1-RELATED PROTEIN 15 348 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy7g0200 368 Pfam EamA-like transporter family 25 150 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0200 Lcy-Chr7:1777495 Lcy13g1039 Lcy-Chr13:22711472 1.84E-19 dispersed
Lcy10g1942 Lcy-Chr10:43488164 Lcy7g0200 Lcy-Chr7:1777495 8.71E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0200 - - - 0.0